Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 AC074044.1-201ENST00000609673 707 ntBASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 AC126365.1-201ENST00000578585 1514 ntBASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CREB3L3Q68CJ9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 SDHAP3-202ENST00000515467 728 ntBASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 GPALPP1-207ENST00000611650 899 ntBASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CREB3L3Q68CJ9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 MST1L-201ENST00000442552 2185 ntBASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 AC015922.1-201ENST00000421102 1152 ntBASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 ZNF890P-202ENST00000530367 1156 ntBASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3L3Q68CJ9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms