Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 AL353705.2-201ENST00000428243 662 ntBASIC15.21■□□□□ 0.03
HMGCS1Q01581 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 AC105021.1-202ENST00000570572 669 ntBASIC15.21■□□□□ 0.03
HMGCS1Q01581 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HMGCS1Q01581 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HMGCS1Q01581 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.21■□□□□ 0.02
HMGCS1Q01581 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HMGCS1Q01581 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HMGCS1Q01581 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
HMGCS1Q01581 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 AL607033.1-201ENST00000623900 1599 ntBASIC15.2■□□□□ 0.02
HMGCS1Q01581 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 AC018529.1-201ENST00000613063 361 ntBASIC15.2■□□□□ 0.02
HMGCS1Q01581 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGCS1Q01581 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCS1Q01581 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCS1Q01581 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.19■□□□□ 0.02
HMGCS1Q01581 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HMGCS1Q01581 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCS1Q01581 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGCS1Q01581 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HMGCS1Q01581 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
HMGCS1Q01581 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCS1Q01581 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCS1Q01581 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCS1Q01581 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HMGCS1Q01581 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCS1Q01581 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCS1Q01581 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGCS1Q01581 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCS1Q01581 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCS1Q01581 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCS1Q01581 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HMGCS1Q01581 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCS1Q01581 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGCS1Q01581 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HMGCS1Q01581 AC211486.1-202ENST00000416371 468 ntBASIC15.19■□□□□ 0.02
HMGCS1Q01581 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms