Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAE1P78406 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAE1P78406 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.91□□□□□ -0.02
RAE1P78406 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.91□□□□□ -0.02
RAE1P78406 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAE1P78406 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.91□□□□□ -0.02
RAE1P78406 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAE1P78406 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RAE1P78406 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
RAE1P78406 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
RAE1P78406 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RAE1P78406 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAE1P78406 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAE1P78406 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAE1P78406 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RAE1P78406 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAE1P78406 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 LINC00528-201ENST00000600723 2160 ntBASIC14.9□□□□□ -0.02
RAE1P78406 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RAE1P78406 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.9□□□□□ -0.02
RAE1P78406 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.9□□□□□ -0.02
RAE1P78406 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.9□□□□□ -0.02
RAE1P78406 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.9□□□□□ -0.02
RAE1P78406 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.9□□□□□ -0.02
RAE1P78406 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.9□□□□□ -0.02
RAE1P78406 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.9□□□□□ -0.02
RAE1P78406 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.9□□□□□ -0.02
RAE1P78406 AC015911.4-201ENST00000588022 1070 ntBASIC14.9□□□□□ -0.02
RAE1P78406 AP001160.2-201ENST00000596071 487 ntBASIC14.9□□□□□ -0.02
RAE1P78406 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.9□□□□□ -0.02
RAE1P78406 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RAE1P78406 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.9□□□□□ -0.02
RAE1P78406 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.9□□□□□ -0.02
RAE1P78406 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RAE1P78406 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAE1P78406 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAE1P78406 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.9□□□□□ -0.02
RAE1P78406 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.89□□□□□ -0.03
RAE1P78406 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.89□□□□□ -0.03
RAE1P78406 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 CICP11-201ENST00000434745 2827 ntBASIC14.89□□□□□ -0.03
RAE1P78406 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
RAE1P78406 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.89□□□□□ -0.03
RAE1P78406 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAE1P78406 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAE1P78406 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms