Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USP46P62068 AC024909.3-201ENST00000611513 2257 ntBASIC16.58■□□□□ 0.24
USP46P62068 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.58■□□□□ 0.24
USP46P62068 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP46P62068 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USP46P62068 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
USP46P62068 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
USP46P62068 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
USP46P62068 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.57■□□□□ 0.24
USP46P62068 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.57■□□□□ 0.24
USP46P62068 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.57■□□□□ 0.24
USP46P62068 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
USP46P62068 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
USP46P62068 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.57■□□□□ 0.24
USP46P62068 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.57■□□□□ 0.24
USP46P62068 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.57■□□□□ 0.24
USP46P62068 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.57■□□□□ 0.24
USP46P62068 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.57■□□□□ 0.24
USP46P62068 MIR4313-201ENST00000580760 101 ntBASIC16.57■□□□□ 0.24
USP46P62068 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.57■□□□□ 0.24
USP46P62068 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
USP46P62068 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
USP46P62068 WFDC1-204ENST00000613603 549 ntBASIC16.57■□□□□ 0.24
USP46P62068 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
USP46P62068 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.57■□□□□ 0.24
USP46P62068 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.57■□□□□ 0.24
USP46P62068 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
USP46P62068 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP46P62068 AL603832.2-201ENST00000566195 2125 ntBASIC16.57■□□□□ 0.24
USP46P62068 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP46P62068 AC010491.1-201ENST00000563101 2797 ntBASIC16.56■□□□□ 0.24
USP46P62068 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.56■□□□□ 0.24
USP46P62068 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
USP46P62068 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
USP46P62068 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.56■□□□□ 0.24
USP46P62068 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC16.56■□□□□ 0.24
USP46P62068 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
USP46P62068 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
USP46P62068 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP46P62068 TMEM261P1-201ENST00000604899 340 ntBASIC16.56■□□□□ 0.24
USP46P62068 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
USP46P62068 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
USP46P62068 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
USP46P62068 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
USP46P62068 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 AC112504.1-201ENST00000623415 1841 ntBASIC16.56■□□□□ 0.24
USP46P62068 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
USP46P62068 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.56■□□□□ 0.24
USP46P62068 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP46P62068 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP46P62068 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.56■□□□□ 0.24
USP46P62068 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
USP46P62068 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.55■□□□□ 0.24
USP46P62068 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms