Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.54■□□□□ 0.08
CDKN2DP55273 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.54■□□□□ 0.08
CDKN2DP55273 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.54■□□□□ 0.08
CDKN2DP55273 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDKN2DP55273 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.54■□□□□ 0.08
CDKN2DP55273 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.54■□□□□ 0.08
CDKN2DP55273 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.54■□□□□ 0.08
CDKN2DP55273 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CDKN2DP55273 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.54■□□□□ 0.08
CDKN2DP55273 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.54■□□□□ 0.08
CDKN2DP55273 Z92544.3-201ENST00000624747 417 ntBASIC15.54■□□□□ 0.08
CDKN2DP55273 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.54■□□□□ 0.08
CDKN2DP55273 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.54■□□□□ 0.08
CDKN2DP55273 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CDKN2DP55273 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.54■□□□□ 0.08
CDKN2DP55273 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKN2DP55273 LINC02228-204ENST00000642115 2962 ntBASIC15.54■□□□□ 0.08
CDKN2DP55273 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.53■□□□□ 0.08
CDKN2DP55273 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CDKN2DP55273 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDKN2DP55273 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKN2DP55273 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CDKN2DP55273 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 TSEN15P1-201ENST00000423257 515 ntBASIC15.53■□□□□ 0.08
CDKN2DP55273 KRT18P64-201ENST00000434946 1219 ntBASIC15.53■□□□□ 0.08
CDKN2DP55273 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.53■□□□□ 0.08
CDKN2DP55273 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKN2DP55273 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKN2DP55273 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.53■□□□□ 0.08
CDKN2DP55273 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKN2DP55273 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKN2DP55273 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKN2DP55273 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKN2DP55273 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.53■□□□□ 0.08
CDKN2DP55273 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKN2DP55273 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.53■□□□□ 0.08
CDKN2DP55273 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.53■□□□□ 0.08
CDKN2DP55273 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKN2DP55273 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKN2DP55273 SPDYE12P-201ENST00000618416 771 ntBASIC15.53■□□□□ 0.08
CDKN2DP55273 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKN2DP55273 AL033527.5-202ENST00000641632 1098 ntBASIC15.53■□□□□ 0.08
CDKN2DP55273 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.53■□□□□ 0.08
CDKN2DP55273 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CDKN2DP55273 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKN2DP55273 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDKN2DP55273 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDKN2DP55273 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKN2DP55273 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKN2DP55273 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKN2DP55273 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKN2DP55273 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKN2DP55273 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKN2DP55273 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKN2DP55273 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKN2DP55273 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDKN2DP55273 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKN2DP55273 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDKN2DP55273 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKN2DP55273 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CDKN2DP55273 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDKN2DP55273 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms