Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.36■□□□□ 0.21
EPHB3P54753 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
EPHB3P54753 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.36■□□□□ 0.21
EPHB3P54753 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.36■□□□□ 0.21
EPHB3P54753 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.36■□□□□ 0.21
EPHB3P54753 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.36■□□□□ 0.21
EPHB3P54753 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.36■□□□□ 0.21
EPHB3P54753 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.36■□□□□ 0.21
EPHB3P54753 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.36■□□□□ 0.21
EPHB3P54753 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.36■□□□□ 0.21
EPHB3P54753 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.36■□□□□ 0.21
EPHB3P54753 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.36■□□□□ 0.21
EPHB3P54753 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.36■□□□□ 0.21
EPHB3P54753 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.36■□□□□ 0.21
EPHB3P54753 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
EPHB3P54753 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
EPHB3P54753 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EPHB3P54753 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.36■□□□□ 0.21
EPHB3P54753 MSTO2P-201ENST00000314835 1709 ntBASIC16.36■□□□□ 0.21
EPHB3P54753 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
EPHB3P54753 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.36■□□□□ 0.21
EPHB3P54753 LINC02447-202ENST00000501888 2146 ntBASIC16.36■□□□□ 0.21
EPHB3P54753 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EPHB3P54753 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
EPHB3P54753 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EPHB3P54753 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
EPHB3P54753 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EPHB3P54753 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EPHB3P54753 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EPHB3P54753 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
EPHB3P54753 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
EPHB3P54753 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.35■□□□□ 0.21
EPHB3P54753 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.35■□□□□ 0.21
EPHB3P54753 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.35■□□□□ 0.21
EPHB3P54753 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
EPHB3P54753 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
EPHB3P54753 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.35■□□□□ 0.21
EPHB3P54753 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
EPHB3P54753 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
EPHB3P54753 C2orf27AP3-201ENST00000434123 579 ntBASIC16.35■□□□□ 0.21
EPHB3P54753 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 FO681548.1-201ENST00000455617 1132 ntBASIC16.35■□□□□ 0.21
EPHB3P54753 FTH1P14-201ENST00000482930 551 ntBASIC16.35■□□□□ 0.21
EPHB3P54753 AC022137.2-201ENST00000503482 481 ntBASIC16.35■□□□□ 0.21
EPHB3P54753 AC092658.1-201ENST00000505836 891 ntBASIC16.35■□□□□ 0.21
EPHB3P54753 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.35■□□□□ 0.21
EPHB3P54753 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.35■□□□□ 0.21
EPHB3P54753 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.35■□□□□ 0.21
EPHB3P54753 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.35■□□□□ 0.21
EPHB3P54753 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.35■□□□□ 0.21
EPHB3P54753 AL354718.3-201ENST00000616414 581 ntBASIC16.35■□□□□ 0.21
EPHB3P54753 CR382287.1-201ENST00000623954 586 ntBASIC16.35■□□□□ 0.21
EPHB3P54753 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.35■□□□□ 0.21
EPHB3P54753 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.35■□□□□ 0.21
EPHB3P54753 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.35■□□□□ 0.21
EPHB3P54753 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHB3P54753 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHB3P54753 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
EPHB3P54753 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
EPHB3P54753 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.34■□□□□ 0.21
EPHB3P54753 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHB3P54753 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHB3P54753 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
EPHB3P54753 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.34■□□□□ 0.21
EPHB3P54753 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.34■□□□□ 0.21
EPHB3P54753 CSF2RBP1-201ENST00000447905 391 ntBASIC16.34■□□□□ 0.21
EPHB3P54753 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms