Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.49■□□□□ 0.55
CACNB3P54284 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.49■□□□□ 0.55
CACNB3P54284 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.49■□□□□ 0.55
CACNB3P54284 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.49■□□□□ 0.55
CACNB3P54284 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNB3P54284 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.49■□□□□ 0.55
CACNB3P54284 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNB3P54284 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.49■□□□□ 0.55
CACNB3P54284 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.49■□□□□ 0.55
CACNB3P54284 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.49■□□□□ 0.55
CACNB3P54284 BX539320.1-201ENST00000623759 877 ntBASIC18.49■□□□□ 0.55
CACNB3P54284 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.49■□□□□ 0.55
CACNB3P54284 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CACNB3P54284 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNB3P54284 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CACNB3P54284 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
CACNB3P54284 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.49■□□□□ 0.55
CACNB3P54284 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CACNB3P54284 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.48■□□□□ 0.55
CACNB3P54284 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 AC022188.1-201ENST00000620960 1664 ntBASIC18.48■□□□□ 0.55
CACNB3P54284 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.48■□□□□ 0.55
CACNB3P54284 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.48■□□□□ 0.55
CACNB3P54284 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.48■□□□□ 0.55
CACNB3P54284 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.48■□□□□ 0.55
CACNB3P54284 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.48■□□□□ 0.55
CACNB3P54284 ECM1P1-201ENST00000604092 1279 ntBASIC18.48■□□□□ 0.55
CACNB3P54284 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.48■□□□□ 0.55
CACNB3P54284 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNB3P54284 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNB3P54284 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CACNB3P54284 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNB3P54284 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CACNB3P54284 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
CACNB3P54284 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.47■□□□□ 0.55
CACNB3P54284 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNB3P54284 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNB3P54284 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CACNB3P54284 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.47■□□□□ 0.55
CACNB3P54284 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.47■□□□□ 0.55
CACNB3P54284 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.47■□□□□ 0.55
CACNB3P54284 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CACNB3P54284 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNB3P54284 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.47■□□□□ 0.55
CACNB3P54284 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.47■□□□□ 0.55
CACNB3P54284 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 AC025181.2-201ENST00000606994 802 ntBASIC18.47■□□□□ 0.55
CACNB3P54284 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.47■□□□□ 0.55
CACNB3P54284 AL139099.5-201ENST00000635274 300 ntBASIC18.47■□□□□ 0.55
CACNB3P54284 AC068587.10-201ENST00000641210 219 ntBASIC18.47■□□□□ 0.55
CACNB3P54284 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNB3P54284 AC148477.4-201ENST00000613430 1793 ntBASIC18.47■□□□□ 0.55
CACNB3P54284 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNB3P54284 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CACNB3P54284 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CACNB3P54284 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.47■□□□□ 0.55
CACNB3P54284 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CACNB3P54284 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms