Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.32■□□□□ 0.36
PMS1P54277 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.32■□□□□ 0.36
PMS1P54277 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.32■□□□□ 0.36
PMS1P54277 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PMS1P54277 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PMS1P54277 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.32■□□□□ 0.36
PMS1P54277 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.31■□□□□ 0.36
PMS1P54277 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.31■□□□□ 0.36
PMS1P54277 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PMS1P54277 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PMS1P54277 RPL37AP1-201ENST00000412502 279 ntBASIC17.31■□□□□ 0.36
PMS1P54277 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.31■□□□□ 0.36
PMS1P54277 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.31■□□□□ 0.36
PMS1P54277 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.31■□□□□ 0.36
PMS1P54277 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.31■□□□□ 0.36
PMS1P54277 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.31■□□□□ 0.36
PMS1P54277 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.31■□□□□ 0.36
PMS1P54277 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.31■□□□□ 0.36
PMS1P54277 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.31■□□□□ 0.36
PMS1P54277 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.31■□□□□ 0.36
PMS1P54277 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.31■□□□□ 0.36
PMS1P54277 AC106881.1-201ENST00000605849 3329 ntBASIC17.31■□□□□ 0.36
PMS1P54277 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMS1P54277 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.31■□□□□ 0.36
PMS1P54277 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PMS1P54277 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PMS1P54277 CICP11-201ENST00000434745 2827 ntBASIC17.3■□□□□ 0.36
PMS1P54277 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PMS1P54277 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PMS1P54277 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PMS1P54277 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PMS1P54277 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PMS1P54277 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.3■□□□□ 0.36
PMS1P54277 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PMS1P54277 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PMS1P54277 DNAJB3-202ENST00000449667 1266 ntBASIC17.3■□□□□ 0.36
PMS1P54277 AC004967.1-201ENST00000453589 447 ntBASIC17.3■□□□□ 0.36
PMS1P54277 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.3■□□□□ 0.36
PMS1P54277 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.3■□□□□ 0.36
PMS1P54277 HLA-J-203ENST00000494367 1087 ntBASIC17.3■□□□□ 0.36
PMS1P54277 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 AC069262.1-201ENST00000539058 672 ntBASIC17.3■□□□□ 0.36
PMS1P54277 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.3■□□□□ 0.36
PMS1P54277 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.3■□□□□ 0.36
PMS1P54277 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.3■□□□□ 0.36
PMS1P54277 AL589739.1-201ENST00000607720 493 ntBASIC17.3■□□□□ 0.36
PMS1P54277 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.3■□□□□ 0.36
PMS1P54277 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.3■□□□□ 0.36
PMS1P54277 LINC00628-201ENST00000628516 1289 ntBASIC17.3■□□□□ 0.36
PMS1P54277 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PMS1P54277 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.3■□□□□ 0.36
PMS1P54277 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.3■□□□□ 0.36
PMS1P54277 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.3■□□□□ 0.36
PMS1P54277 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PMS1P54277 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.3■□□□□ 0.36
PMS1P54277 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PMS1P54277 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms