Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL139384.1-201ENST00000612143 3047 ntBASIC15.28■□□□□ 0.04
PDX1P52945 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
PDX1P52945 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDX1P52945 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDX1P52945 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDX1P52945 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PDX1P52945 AC004987.2-201ENST00000395959 1148 ntBASIC15.28■□□□□ 0.04
PDX1P52945 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.28■□□□□ 0.04
PDX1P52945 AL442647.2-201ENST00000429864 857 ntBASIC15.28■□□□□ 0.04
PDX1P52945 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.28■□□□□ 0.04
PDX1P52945 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.28■□□□□ 0.04
PDX1P52945 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.28■□□□□ 0.04
PDX1P52945 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.28■□□□□ 0.04
PDX1P52945 MIR5189-201ENST00000577370 114 ntBASIC15.28■□□□□ 0.04
PDX1P52945 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.28■□□□□ 0.04
PDX1P52945 AC233724.13-201ENST00000598383 410 ntBASIC15.28■□□□□ 0.04
PDX1P52945 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.28■□□□□ 0.04
PDX1P52945 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDX1P52945 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDX1P52945 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDX1P52945 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDX1P52945 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDX1P52945 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDX1P52945 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDX1P52945 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PDX1P52945 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDX1P52945 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDX1P52945 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.27■□□□□ 0.04
PDX1P52945 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PDX1P52945 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDX1P52945 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDX1P52945 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
PDX1P52945 AC024909.3-201ENST00000611513 2257 ntBASIC15.27■□□□□ 0.04
PDX1P52945 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDX1P52945 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDX1P52945 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.27■□□□□ 0.04
PDX1P52945 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDX1P52945 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDX1P52945 FAM86MP-201ENST00000340703 885 ntBASIC15.27■□□□□ 0.04
PDX1P52945 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDX1P52945 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.27■□□□□ 0.04
PDX1P52945 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDX1P52945 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.27■□□□□ 0.04
PDX1P52945 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.27■□□□□ 0.04
PDX1P52945 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PDX1P52945 AC104989.1-201ENST00000519711 778 ntBASIC15.27■□□□□ 0.04
PDX1P52945 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PDX1P52945 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.27■□□□□ 0.04
PDX1P52945 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.27■□□□□ 0.04
PDX1P52945 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.27■□□□□ 0.04
PDX1P52945 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.27■□□□□ 0.04
PDX1P52945 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.27■□□□□ 0.04
PDX1P52945 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDX1P52945 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.27■□□□□ 0.03
PDX1P52945 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PDX1P52945 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.27■□□□□ 0.03
PDX1P52945 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.27■□□□□ 0.03
PDX1P52945 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.27■□□□□ 0.03
PDX1P52945 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.27■□□□□ 0.03
PDX1P52945 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.27■□□□□ 0.03
PDX1P52945 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PDX1P52945 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PDX1P52945 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PDX1P52945 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PDX1P52945 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDX1P52945 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 KRT8P37-201ENST00000451609 1420 ntBASIC15.26■□□□□ 0.03
PDX1P52945 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.26■□□□□ 0.03
PDX1P52945 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PDX1P52945 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms