Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC005840.4-201ENST00000541242 2494 ntBASIC14.06□□□□□ -0.16
SRP9P49458 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SRP9P49458 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.06□□□□□ -0.16
SRP9P49458 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SRP9P49458 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
SRP9P49458 ELL2P1-201ENST00000413990 1906 ntBASIC14.06□□□□□ -0.16
SRP9P49458 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.06□□□□□ -0.16
SRP9P49458 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.06□□□□□ -0.16
SRP9P49458 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.06□□□□□ -0.16
SRP9P49458 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.06□□□□□ -0.16
SRP9P49458 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 RPSAP43-201ENST00000402237 625 ntBASIC14.06□□□□□ -0.16
SRP9P49458 AL355306.1-201ENST00000415580 579 ntBASIC14.06□□□□□ -0.16
SRP9P49458 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.06□□□□□ -0.16
SRP9P49458 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SRP9P49458 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 ALG1L5P-201ENST00000482043 771 ntBASIC14.06□□□□□ -0.16
SRP9P49458 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SRP9P49458 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.06□□□□□ -0.16
SRP9P49458 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.06□□□□□ -0.16
SRP9P49458 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 OR2I1P-210ENST00000642037 4691 ntBASIC14.06□□□□□ -0.16
SRP9P49458 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.06□□□□□ -0.16
SRP9P49458 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.06□□□□□ -0.16
SRP9P49458 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.06□□□□□ -0.16
SRP9P49458 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.06□□□□□ -0.16
SRP9P49458 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SRP9P49458 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
SRP9P49458 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRP9P49458 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.05□□□□□ -0.16
SRP9P49458 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.05□□□□□ -0.16
SRP9P49458 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SRP9P49458 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.05□□□□□ -0.16
SRP9P49458 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SRP9P49458 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 MIR1233-2-201ENST00000408138 82 ntBASIC14.05□□□□□ -0.16
SRP9P49458 MIR1233-1-201ENST00000408722 82 ntBASIC14.05□□□□□ -0.16
SRP9P49458 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 SPDYE11-202ENST00000450699 704 ntBASIC14.05□□□□□ -0.16
SRP9P49458 AC112482.1-201ENST00000492080 688 ntBASIC14.05□□□□□ -0.16
SRP9P49458 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.05□□□□□ -0.16
SRP9P49458 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.05□□□□□ -0.16
SRP9P49458 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.05□□□□□ -0.16
SRP9P49458 SPDYE9P-201ENST00000570642 692 ntBASIC14.05□□□□□ -0.16
SRP9P49458 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SRP9P49458 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.05□□□□□ -0.16
SRP9P49458 AC099522.2-201ENST00000607001 744 ntBASIC14.05□□□□□ -0.16
SRP9P49458 SPDYE10P-202ENST00000612005 668 ntBASIC14.05□□□□□ -0.16
SRP9P49458 SPDYE8P-202ENST00000612377 668 ntBASIC14.05□□□□□ -0.16
SRP9P49458 AC023511.2-201ENST00000618803 211 ntBASIC14.05□□□□□ -0.16
SRP9P49458 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRP9P49458 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms