Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TNNI2P48788 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNNI2P48788 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.62■□□□□ 0.57
TNNI2P48788 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TNNI2P48788 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TNNI2P48788 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.62■□□□□ 0.57
TNNI2P48788 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.62■□□□□ 0.57
TNNI2P48788 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNNI2P48788 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNNI2P48788 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNNI2P48788 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TNNI2P48788 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.61■□□□□ 0.57
TNNI2P48788 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNNI2P48788 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.61■□□□□ 0.57
TNNI2P48788 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNNI2P48788 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.61■□□□□ 0.57
TNNI2P48788 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNNI2P48788 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.61■□□□□ 0.57
TNNI2P48788 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.61■□□□□ 0.57
TNNI2P48788 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TNNI2P48788 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.61■□□□□ 0.57
TNNI2P48788 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.61■□□□□ 0.57
TNNI2P48788 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNNI2P48788 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNNI2P48788 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNNI2P48788 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.61■□□□□ 0.57
TNNI2P48788 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.61■□□□□ 0.57
TNNI2P48788 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.61■□□□□ 0.57
TNNI2P48788 KRT18P25-201ENST00000508931 1278 ntBASIC18.61■□□□□ 0.57
TNNI2P48788 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.61■□□□□ 0.57
TNNI2P48788 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.61■□□□□ 0.57
TNNI2P48788 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TNNI2P48788 AC091271.1-201ENST00000611877 1162 ntBASIC18.61■□□□□ 0.57
TNNI2P48788 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNNI2P48788 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.61■□□□□ 0.57
TNNI2P48788 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNNI2P48788 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNNI2P48788 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TNNI2P48788 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.6■□□□□ 0.57
TNNI2P48788 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.6■□□□□ 0.57
TNNI2P48788 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TNNI2P48788 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.6■□□□□ 0.57
TNNI2P48788 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TNNI2P48788 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 MIR648-201ENST00000385046 94 ntBASIC18.6■□□□□ 0.57
TNNI2P48788 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.6■□□□□ 0.57
TNNI2P48788 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.6■□□□□ 0.57
TNNI2P48788 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.6■□□□□ 0.57
TNNI2P48788 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TNNI2P48788 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.6■□□□□ 0.57
TNNI2P48788 AC025279.2-201ENST00000569730 653 ntBASIC18.6■□□□□ 0.57
TNNI2P48788 AC015910.1-201ENST00000579400 975 ntBASIC18.6■□□□□ 0.57
TNNI2P48788 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.6■□□□□ 0.57
TNNI2P48788 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.6■□□□□ 0.57
TNNI2P48788 AP005019.2-201ENST00000615104 511 ntBASIC18.6■□□□□ 0.57
TNNI2P48788 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.6■□□□□ 0.57
TNNI2P48788 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TNNI2P48788 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.6■□□□□ 0.57
TNNI2P48788 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.6■□□□□ 0.57
TNNI2P48788 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.6■□□□□ 0.57
TNNI2P48788 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.6■□□□□ 0.57
TNNI2P48788 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.6■□□□□ 0.57
TNNI2P48788 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNNI2P48788 AL118508.1-201ENST00000613502 2345 ntBASIC18.6■□□□□ 0.57
TNNI2P48788 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.59■□□□□ 0.57
TNNI2P48788 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.59■□□□□ 0.57
TNNI2P48788 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.59■□□□□ 0.57
TNNI2P48788 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.59■□□□□ 0.57
TNNI2P48788 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNNI2P48788 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TNNI2P48788 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms