Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC1A6P48664 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC1A6P48664 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A6P48664 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC1A6P48664 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.53■□□□□ 0.08
SLC1A6P48664 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A6P48664 AL138918.1-201ENST00000568306 659 ntBASIC15.53■□□□□ 0.08
SLC1A6P48664 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A6P48664 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A6P48664 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC1A6P48664 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A6P48664 AC139749.1-202ENST00000617529 3139 ntBASIC15.53■□□□□ 0.08
SLC1A6P48664 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A6P48664 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC1A6P48664 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A6P48664 OR2I1P-209ENST00000641730 5365 ntBASIC15.53■□□□□ 0.08
SLC1A6P48664 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A6P48664 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A6P48664 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SLC1A6P48664 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SLC1A6P48664 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC1A6P48664 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC1A6P48664 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SLC1A6P48664 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC1A6P48664 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC1A6P48664 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 AL136982.4-201ENST00000437689 1740 ntBASIC15.52■□□□□ 0.08
SLC1A6P48664 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 BCAR1-209ENST00000546196 1340 ntBASIC15.52■□□□□ 0.08
SLC1A6P48664 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SLC1A6P48664 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC1A6P48664 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC1A6P48664 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 RPS8P6-201ENST00000426177 609 ntBASIC15.52■□□□□ 0.08
SLC1A6P48664 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC1A6P48664 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC1A6P48664 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 RNA5SP415-201ENST00000517246 115 ntBASIC15.52■□□□□ 0.08
SLC1A6P48664 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC1A6P48664 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 AC116407.3-201ENST00000623905 1129 ntBASIC15.52■□□□□ 0.08
SLC1A6P48664 AC004877.2-201ENST00000623941 599 ntBASIC15.52■□□□□ 0.08
SLC1A6P48664 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC1A6P48664 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
SLC1A6P48664 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC1A6P48664 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC1A6P48664 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC1A6P48664 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC1A6P48664 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.52■□□□□ 0.07
SLC1A6P48664 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC1A6P48664 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC1A6P48664 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC1A6P48664 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC1A6P48664 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SLC1A6P48664 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SLC1A6P48664 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC1A6P48664 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SLC1A6P48664 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SLC1A6P48664 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC1A6P48664 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC1A6P48664 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC1A6P48664 PHKG1P2-201ENST00000457537 863 ntBASIC15.51■□□□□ 0.07
SLC1A6P48664 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC1A6P48664 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SLC1A6P48664 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC1A6P48664 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
SLC1A6P48664 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.51■□□□□ 0.07
SLC1A6P48664 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC1A6P48664 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC1A6P48664 AL773604.1-201ENST00000617417 272 ntBASIC15.51■□□□□ 0.07
SLC1A6P48664 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC1A6P48664 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC1A6P48664 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms