Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP13P45452 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP13P45452 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 AC069262.1-201ENST00000539058 672 ntBASIC16.41■□□□□ 0.22
MMP13P45452 AC243562.2-201ENST00000561247 970 ntBASIC16.41■□□□□ 0.22
MMP13P45452 MIR4453-201ENST00000584019 89 ntBASIC16.41■□□□□ 0.22
MMP13P45452 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 AC007967.4-201ENST00000614700 386 ntBASIC16.41■□□□□ 0.22
MMP13P45452 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.41■□□□□ 0.22
MMP13P45452 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP13P45452 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.41■□□□□ 0.22
MMP13P45452 AL691432.1-201ENST00000596308 1422 ntBASIC16.41■□□□□ 0.22
MMP13P45452 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP13P45452 LINC00528-201ENST00000600723 2160 ntBASIC16.41■□□□□ 0.22
MMP13P45452 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MMP13P45452 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MMP13P45452 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP13P45452 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP13P45452 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP13P45452 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
MMP13P45452 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
MMP13P45452 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP13P45452 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.4■□□□□ 0.22
MMP13P45452 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP13P45452 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP13P45452 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.4■□□□□ 0.22
MMP13P45452 AC025678.2-201ENST00000562061 970 ntBASIC16.4■□□□□ 0.22
MMP13P45452 AC105021.1-202ENST00000570572 669 ntBASIC16.4■□□□□ 0.22
MMP13P45452 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP13P45452 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.4■□□□□ 0.22
MMP13P45452 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.4■□□□□ 0.22
MMP13P45452 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MMP13P45452 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP13P45452 AC134407.2-201ENST00000625089 1978 ntBASIC16.4■□□□□ 0.22
MMP13P45452 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MMP13P45452 KRT18P28-201ENST00000453838 1332 ntBASIC16.4■□□□□ 0.22
MMP13P45452 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MMP13P45452 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
MMP13P45452 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP13P45452 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
MMP13P45452 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MMP13P45452 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 GRK6P1-201ENST00000400595 1711 ntBASIC16.39■□□□□ 0.21
MMP13P45452 AL136982.4-201ENST00000437689 1740 ntBASIC16.39■□□□□ 0.21
MMP13P45452 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP13P45452 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP13P45452 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MMP13P45452 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP13P45452 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
MMP13P45452 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MMP13P45452 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
MMP13P45452 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MMP13P45452 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MMP13P45452 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.39■□□□□ 0.21
MMP13P45452 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP13P45452 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.39■□□□□ 0.21
MMP13P45452 METTL21AP1-201ENST00000438852 635 ntBASIC16.39■□□□□ 0.21
MMP13P45452 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 BANF1P1-201ENST00000553684 263 ntBASIC16.39■□□□□ 0.21
MMP13P45452 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MMP13P45452 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.39■□□□□ 0.21
MMP13P45452 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
MMP13P45452 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.39■□□□□ 0.21
MMP13P45452 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.39■□□□□ 0.21
MMP13P45452 Z92544.3-201ENST00000624747 417 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms