Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SSR1P43307 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.85■□□□□ 0.29
SSR1P43307 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.85■□□□□ 0.29
SSR1P43307 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.85■□□□□ 0.29
SSR1P43307 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.85■□□□□ 0.29
SSR1P43307 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.85■□□□□ 0.29
SSR1P43307 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.85■□□□□ 0.29
SSR1P43307 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SSR1P43307 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.85■□□□□ 0.29
SSR1P43307 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.85■□□□□ 0.29
SSR1P43307 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.85■□□□□ 0.29
SSR1P43307 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.85■□□□□ 0.29
SSR1P43307 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SSR1P43307 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SSR1P43307 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SSR1P43307 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.84■□□□□ 0.29
SSR1P43307 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.84■□□□□ 0.29
SSR1P43307 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.84■□□□□ 0.29
SSR1P43307 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.84■□□□□ 0.29
SSR1P43307 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.84■□□□□ 0.29
SSR1P43307 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.84■□□□□ 0.29
SSR1P43307 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.84■□□□□ 0.29
SSR1P43307 HTR5BP-201ENST00000430851 1154 ntBASIC16.84■□□□□ 0.29
SSR1P43307 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.84■□□□□ 0.29
SSR1P43307 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.84■□□□□ 0.29
SSR1P43307 PGAM5P1-201ENST00000518923 814 ntBASIC16.84■□□□□ 0.29
SSR1P43307 AC243562.2-201ENST00000561247 970 ntBASIC16.84■□□□□ 0.29
SSR1P43307 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SSR1P43307 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
SSR1P43307 AC061975.2-201ENST00000581722 295 ntBASIC16.84■□□□□ 0.29
SSR1P43307 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.84■□□□□ 0.29
SSR1P43307 MTDHP5-201ENST00000598980 586 ntBASIC16.84■□□□□ 0.29
SSR1P43307 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.84■□□□□ 0.29
SSR1P43307 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.84■□□□□ 0.29
SSR1P43307 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.84■□□□□ 0.29
SSR1P43307 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SSR1P43307 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.84■□□□□ 0.29
SSR1P43307 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.84■□□□□ 0.29
SSR1P43307 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSR1P43307 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SSR1P43307 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SSR1P43307 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.83■□□□□ 0.29
SSR1P43307 AC092127.1-201ENST00000567093 3455 ntBASIC16.83■□□□□ 0.29
SSR1P43307 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSR1P43307 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSR1P43307 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSR1P43307 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SSR1P43307 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSR1P43307 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSR1P43307 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSR1P43307 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSR1P43307 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSR1P43307 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSR1P43307 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.83■□□□□ 0.28
SSR1P43307 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSR1P43307 AC142381.1-201ENST00000426099 345 ntBASIC16.83■□□□□ 0.28
SSR1P43307 AC004832.2-201ENST00000426397 482 ntBASIC16.83■□□□□ 0.28
SSR1P43307 AL592309.1-201ENST00000443127 649 ntBASIC16.83■□□□□ 0.28
SSR1P43307 CEND1P1-201ENST00000451006 455 ntBASIC16.83■□□□□ 0.28
SSR1P43307 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SSR1P43307 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.83■□□□□ 0.28
SSR1P43307 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.83■□□□□ 0.28
SSR1P43307 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.83■□□□□ 0.28
SSR1P43307 ALG1L5P-201ENST00000482043 771 ntBASIC16.83■□□□□ 0.28
SSR1P43307 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.83■□□□□ 0.28
SSR1P43307 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSR1P43307 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms