Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFC3P40938 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFC3P40938 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RFC3P40938 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
RFC3P40938 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFC3P40938 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.47□□□□□ -0.09
RFC3P40938 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RFC3P40938 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFC3P40938 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFC3P40938 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFC3P40938 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFC3P40938 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.47□□□□□ -0.09
RFC3P40938 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFC3P40938 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFC3P40938 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RFC3P40938 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.46□□□□□ -0.09
RFC3P40938 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
RFC3P40938 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.46□□□□□ -0.09
RFC3P40938 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RFC3P40938 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.46□□□□□ -0.09
RFC3P40938 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 TARDBPP1-201ENST00000442013 1203 ntBASIC14.46□□□□□ -0.09
RFC3P40938 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.46□□□□□ -0.09
RFC3P40938 GIMAP3P-201ENST00000495150 836 ntBASIC14.46□□□□□ -0.09
RFC3P40938 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.46□□□□□ -0.09
RFC3P40938 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.46□□□□□ -0.09
RFC3P40938 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
RFC3P40938 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.46□□□□□ -0.09
RFC3P40938 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFC3P40938 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.46□□□□□ -0.09
RFC3P40938 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.46□□□□□ -0.1
RFC3P40938 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.46□□□□□ -0.1
RFC3P40938 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RFC3P40938 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RFC3P40938 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RFC3P40938 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RFC3P40938 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RFC3P40938 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.46□□□□□ -0.1
RFC3P40938 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RFC3P40938 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RFC3P40938 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.46□□□□□ -0.1
RFC3P40938 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 REXO1L1P-202ENST00000608646 1974 ntBASIC14.45□□□□□ -0.1
RFC3P40938 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.45□□□□□ -0.1
RFC3P40938 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RFC3P40938 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
RFC3P40938 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 OR8S1-201ENST00000310194 1080 ntBASIC14.45□□□□□ -0.1
RFC3P40938 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.45□□□□□ -0.1
RFC3P40938 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RFC3P40938 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 AL512384.1-201ENST00000406683 331 ntBASIC14.45□□□□□ -0.1
RFC3P40938 AC074338.1-201ENST00000416825 156 ntBASIC14.45□□□□□ -0.1
RFC3P40938 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.45□□□□□ -0.1
RFC3P40938 MEP1AP4-201ENST00000423244 1087 ntBASIC14.45□□□□□ -0.1
RFC3P40938 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.45□□□□□ -0.1
RFC3P40938 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RFC3P40938 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RFC3P40938 AC093726.1-201ENST00000608064 963 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms