Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.27■□□□□ 0.2
CCR1P32246 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.27■□□□□ 0.2
CCR1P32246 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CCR1P32246 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCR1P32246 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.27■□□□□ 0.2
CCR1P32246 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCR1P32246 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.27■□□□□ 0.2
CCR1P32246 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.27■□□□□ 0.2
CCR1P32246 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.27■□□□□ 0.2
CCR1P32246 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.27■□□□□ 0.2
CCR1P32246 AC036164.1-201ENST00000570544 333 ntBASIC16.27■□□□□ 0.2
CCR1P32246 AL391069.4-201ENST00000609583 481 ntBASIC16.27■□□□□ 0.2
CCR1P32246 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCR1P32246 AL121723.1-201ENST00000445194 1519 ntBASIC16.27■□□□□ 0.2
CCR1P32246 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.27■□□□□ 0.2
CCR1P32246 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR1P32246 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCR1P32246 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCR1P32246 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.27■□□□□ 0.19
CCR1P32246 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.27■□□□□ 0.19
CCR1P32246 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.27■□□□□ 0.19
CCR1P32246 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.27■□□□□ 0.19
CCR1P32246 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCR1P32246 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CCR1P32246 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CCR1P32246 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCR1P32246 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
CCR1P32246 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.27■□□□□ 0.19
CCR1P32246 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.27■□□□□ 0.19
CCR1P32246 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CCR1P32246 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCR1P32246 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCR1P32246 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCR1P32246 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCR1P32246 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCR1P32246 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CCR1P32246 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.26■□□□□ 0.19
CCR1P32246 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.26■□□□□ 0.19
CCR1P32246 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.26■□□□□ 0.19
CCR1P32246 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.26■□□□□ 0.19
CCR1P32246 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCR1P32246 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.26■□□□□ 0.19
CCR1P32246 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.26■□□□□ 0.19
CCR1P32246 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.26■□□□□ 0.19
CCR1P32246 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCR1P32246 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.26■□□□□ 0.19
CCR1P32246 AC190387.1-201ENST00000551683 408 ntBASIC16.26■□□□□ 0.19
CCR1P32246 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.26■□□□□ 0.19
CCR1P32246 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.26■□□□□ 0.19
CCR1P32246 AC015910.1-201ENST00000579400 975 ntBASIC16.26■□□□□ 0.19
CCR1P32246 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.26■□□□□ 0.19
CCR1P32246 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.26■□□□□ 0.19
CCR1P32246 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.26■□□□□ 0.19
CCR1P32246 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.26■□□□□ 0.19
CCR1P32246 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.26■□□□□ 0.19
CCR1P32246 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 AC092850.2-201ENST00000623821 2697 ntBASIC16.26■□□□□ 0.19
CCR1P32246 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.26■□□□□ 0.19
CCR1P32246 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR1P32246 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCR1P32246 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.25■□□□□ 0.19
CCR1P32246 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCR1P32246 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCR1P32246 AC105250.1-201ENST00000509378 2057 ntBASIC16.25■□□□□ 0.19
CCR1P32246 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCR1P32246 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms