Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.02□□□□□ -0.17
HOXC12P31275 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
HOXC12P31275 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.02□□□□□ -0.17
HOXC12P31275 FO393414.2-201ENST00000405153 598 ntBASIC14.02□□□□□ -0.17
HOXC12P31275 SPDYE17-201ENST00000412399 783 ntBASIC14.02□□□□□ -0.17
HOXC12P31275 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.02□□□□□ -0.17
HOXC12P31275 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 INE1-201ENST00000456273 945 ntBASIC14.02□□□□□ -0.17
HOXC12P31275 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.02□□□□□ -0.17
HOXC12P31275 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
HOXC12P31275 AC104794.3-201ENST00000566840 1248 ntBASIC14.02□□□□□ -0.17
HOXC12P31275 AC106886.1-201ENST00000568660 600 ntBASIC14.02□□□□□ -0.17
HOXC12P31275 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HOXC12P31275 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HOXC12P31275 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.02□□□□□ -0.17
HOXC12P31275 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.02□□□□□ -0.17
HOXC12P31275 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.02□□□□□ -0.17
HOXC12P31275 AL033527.5-202ENST00000641632 1098 ntBASIC14.02□□□□□ -0.17
HOXC12P31275 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.02□□□□□ -0.17
HOXC12P31275 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
HOXC12P31275 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
HOXC12P31275 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.02□□□□□ -0.17
HOXC12P31275 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXC12P31275 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.02□□□□□ -0.17
HOXC12P31275 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXC12P31275 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HOXC12P31275 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXC12P31275 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 AC079776.1-201ENST00000401540 1152 ntBASIC14.01□□□□□ -0.17
HOXC12P31275 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 AL512384.1-201ENST00000406683 331 ntBASIC14.01□□□□□ -0.17
HOXC12P31275 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXC12P31275 MIR1909-201ENST00000411312 80 ntBASIC14.01□□□□□ -0.17
HOXC12P31275 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 AC245100.3-201ENST00000441281 285 ntBASIC14.01□□□□□ -0.17
HOXC12P31275 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HOXC12P31275 ACA64.2-201ENST00000459014 129 ntBASIC14.01□□□□□ -0.17
HOXC12P31275 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXC12P31275 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.01□□□□□ -0.17
HOXC12P31275 MIR6805-201ENST00000615055 62 ntBASIC14.01□□□□□ -0.17
HOXC12P31275 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.01□□□□□ -0.17
HOXC12P31275 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HOXC12P31275 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXC12P31275 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.01□□□□□ -0.17
HOXC12P31275 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HOXC12P31275 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HOXC12P31275 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXC12P31275 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HOXC12P31275 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14□□□□□ -0.17
HOXC12P31275 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms