Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXC8P31273 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXC8P31273 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXC8P31273 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HOXC8P31273 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HOXC8P31273 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.9■□□□□ 0.3
HOXC8P31273 BX284668.4-201ENST00000453917 508 ntBASIC16.9■□□□□ 0.3
HOXC8P31273 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXC8P31273 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HOXC8P31273 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXC8P31273 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
HOXC8P31273 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.9■□□□□ 0.3
HOXC8P31273 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.9■□□□□ 0.3
HOXC8P31273 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXC8P31273 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXC8P31273 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HOXC8P31273 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HOXC8P31273 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 AC020916.1-201ENST00000587762 1774 ntBASIC16.89■□□□□ 0.3
HOXC8P31273 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.89■□□□□ 0.3
HOXC8P31273 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HOXC8P31273 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXC8P31273 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 AC138028.6-201ENST00000616106 1482 ntBASIC16.89■□□□□ 0.29
HOXC8P31273 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXC8P31273 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 RPL5P21-201ENST00000404620 815 ntBASIC16.89■□□□□ 0.29
HOXC8P31273 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.89■□□□□ 0.29
HOXC8P31273 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.89■□□□□ 0.29
HOXC8P31273 AC079178.1-201ENST00000420915 656 ntBASIC16.89■□□□□ 0.29
HOXC8P31273 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.89■□□□□ 0.29
HOXC8P31273 HLA-K-203ENST00000430151 1046 ntBASIC16.89■□□□□ 0.29
HOXC8P31273 POM121L10P-201ENST00000436994 1285 ntBASIC16.89■□□□□ 0.29
HOXC8P31273 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.89■□□□□ 0.29
HOXC8P31273 AKR7A2P1-201ENST00000460134 915 ntBASIC16.89■□□□□ 0.29
HOXC8P31273 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.89■□□□□ 0.29
HOXC8P31273 DUX4L47-201ENST00000566374 394 ntBASIC16.89■□□□□ 0.29
HOXC8P31273 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXC8P31273 AC073413.1-201ENST00000603927 732 ntBASIC16.89■□□□□ 0.29
HOXC8P31273 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC8P31273 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC8P31273 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.89■□□□□ 0.29
HOXC8P31273 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC8P31273 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXC8P31273 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC8P31273 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HOXC8P31273 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HOXC8P31273 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC8P31273 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXC8P31273 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HOXC8P31273 PCDH8P1-201ENST00000428983 2773 ntBASIC16.88■□□□□ 0.29
HOXC8P31273 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HOXC8P31273 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXC8P31273 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXC8P31273 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HOXC8P31273 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXC8P31273 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HOXC8P31273 FAM8A4P-201ENST00000435433 1213 ntBASIC16.88■□□□□ 0.29
HOXC8P31273 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXC8P31273 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 AC022616.1-201ENST00000518688 554 ntBASIC16.88■□□□□ 0.29
HOXC8P31273 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC8P31273 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC8P31273 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms