Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.96□□□□□ -0.01
PTPN6P29350 AL136379.1-201ENST00000623471 2642 ntBASIC14.96□□□□□ -0.01
PTPN6P29350 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.96□□□□□ -0.01
PTPN6P29350 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.96□□□□□ -0.01
PTPN6P29350 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.96□□□□□ -0.01
PTPN6P29350 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 CICP23-201ENST00000605013 2741 ntBASIC14.96□□□□□ -0.01
PTPN6P29350 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.96□□□□□ -0.01
PTPN6P29350 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
PTPN6P29350 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
PTPN6P29350 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PTPN6P29350 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.96□□□□□ -0.01
PTPN6P29350 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.96□□□□□ -0.01
PTPN6P29350 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.96□□□□□ -0.01
PTPN6P29350 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PTPN6P29350 AC025678.2-201ENST00000562061 970 ntBASIC14.96□□□□□ -0.01
PTPN6P29350 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
PTPN6P29350 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.96□□□□□ -0.01
PTPN6P29350 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.96□□□□□ -0.01
PTPN6P29350 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.96□□□□□ -0.01
PTPN6P29350 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 AP001059.3-201ENST00000619053 235 ntBASIC14.96□□□□□ -0.01
PTPN6P29350 LINC01101-201ENST00000622953 1884 ntBASIC14.96□□□□□ -0.01
PTPN6P29350 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
PTPN6P29350 AC106881.1-201ENST00000605849 3329 ntBASIC14.96□□□□□ -0.01
PTPN6P29350 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.96□□□□□ -0.01
PTPN6P29350 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.96□□□□□ -0.01
PTPN6P29350 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PTPN6P29350 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.96□□□□□ -0.01
PTPN6P29350 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.96□□□□□ -0.01
PTPN6P29350 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PTPN6P29350 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PTPN6P29350 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.96□□□□□ -0.02
PTPN6P29350 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.96□□□□□ -0.02
PTPN6P29350 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.96□□□□□ -0.02
PTPN6P29350 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PTPN6P29350 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 LINC00528-201ENST00000600723 2160 ntBASIC14.95□□□□□ -0.02
PTPN6P29350 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PTPN6P29350 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PTPN6P29350 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 AL645939.2-201ENST00000427340 991 ntBASIC14.95□□□□□ -0.02
PTPN6P29350 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.95□□□□□ -0.02
PTPN6P29350 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 SPDYE14P-201ENST00000442619 822 ntBASIC14.95□□□□□ -0.02
PTPN6P29350 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.95□□□□□ -0.02
PTPN6P29350 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 ALG1L8P-201ENST00000533887 760 ntBASIC14.95□□□□□ -0.02
PTPN6P29350 AL512356.2-201ENST00000546955 174 ntBASIC14.95□□□□□ -0.02
PTPN6P29350 AC026150.2-201ENST00000564693 1156 ntBASIC14.95□□□□□ -0.02
PTPN6P29350 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.95□□□□□ -0.02
PTPN6P29350 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms