Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MMP8P22894 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP8P22894 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.53■□□□□ 0.24
MMP8P22894 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MMP8P22894 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.52■□□□□ 0.24
MMP8P22894 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP8P22894 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP8P22894 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
MMP8P22894 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.24
MMP8P22894 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP8P22894 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
MMP8P22894 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP8P22894 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.52■□□□□ 0.24
MMP8P22894 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.52■□□□□ 0.24
MMP8P22894 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.52■□□□□ 0.24
MMP8P22894 AC055876.3-201ENST00000431496 288 ntBASIC16.52■□□□□ 0.24
MMP8P22894 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.52■□□□□ 0.24
MMP8P22894 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.52■□□□□ 0.24
MMP8P22894 AC138649.4-201ENST00000612222 287 ntBASIC16.52■□□□□ 0.24
MMP8P22894 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.52■□□□□ 0.24
MMP8P22894 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MMP8P22894 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP8P22894 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP8P22894 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP8P22894 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP8P22894 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
MMP8P22894 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP8P22894 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.52■□□□□ 0.23
MMP8P22894 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP8P22894 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP8P22894 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MMP8P22894 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
MMP8P22894 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP8P22894 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
MMP8P22894 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP8P22894 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
MMP8P22894 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
MMP8P22894 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP8P22894 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP8P22894 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
MMP8P22894 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP8P22894 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP8P22894 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP8P22894 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP8P22894 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.51■□□□□ 0.23
MMP8P22894 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 AL133267.1-201ENST00000398220 340 ntBASIC16.51■□□□□ 0.23
MMP8P22894 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP8P22894 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.51■□□□□ 0.23
MMP8P22894 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP8P22894 AC009407.1-201ENST00000568958 598 ntBASIC16.51■□□□□ 0.23
MMP8P22894 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
MMP8P22894 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP8P22894 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
MMP8P22894 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
MMP8P22894 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.51■□□□□ 0.23
MMP8P22894 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
MMP8P22894 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
MMP8P22894 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
MMP8P22894 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 AC091951.1-201ENST00000512854 2465 ntBASIC16.51■□□□□ 0.23
MMP8P22894 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP8P22894 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP8P22894 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP8P22894 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
MMP8P22894 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.5■□□□□ 0.23
MMP8P22894 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
MMP8P22894 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms