Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL138828.2-201ENST00000615812 383 ntBASIC17.15■□□□□ 0.34
RFX1P22670 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RFX1P22670 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RFX1P22670 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RFX1P22670 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RFX1P22670 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RFX1P22670 AC090616.6-203ENST00000579186 1945 ntBASIC17.15■□□□□ 0.34
RFX1P22670 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RFX1P22670 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RFX1P22670 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RFX1P22670 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFX1P22670 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
RFX1P22670 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX1P22670 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
RFX1P22670 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX1P22670 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX1P22670 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX1P22670 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX1P22670 SPTLC1P1-201ENST00000447199 261 ntBASIC17.14■□□□□ 0.33
RFX1P22670 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.14■□□□□ 0.33
RFX1P22670 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX1P22670 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RFX1P22670 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX1P22670 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.14■□□□□ 0.33
RFX1P22670 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 AC018892.3-201ENST00000623986 2499 ntBASIC17.14■□□□□ 0.33
RFX1P22670 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFX1P22670 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFX1P22670 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFX1P22670 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
RFX1P22670 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RFX1P22670 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RFX1P22670 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX1P22670 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
RFX1P22670 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFX1P22670 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX1P22670 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RFX1P22670 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX1P22670 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RFX1P22670 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX1P22670 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX1P22670 AC073347.1-201ENST00000421633 2643 ntBASIC17.13■□□□□ 0.33
RFX1P22670 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RFX1P22670 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX1P22670 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX1P22670 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.13■□□□□ 0.33
RFX1P22670 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.13■□□□□ 0.33
RFX1P22670 GIMAP3P-201ENST00000495150 836 ntBASIC17.13■□□□□ 0.33
RFX1P22670 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.13■□□□□ 0.33
RFX1P22670 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX1P22670 TP53TG3HP-202ENST00000569755 579 ntBASIC17.13■□□□□ 0.33
RFX1P22670 AC007967.4-201ENST00000614700 386 ntBASIC17.13■□□□□ 0.33
RFX1P22670 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFX1P22670 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFX1P22670 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX1P22670 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms