Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH3P22223 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH3P22223 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH3P22223 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.52■□□□□ 0.08
CDH3P22223 RN7SL618P-201ENST00000477850 296 ntBASIC15.52■□□□□ 0.08
CDH3P22223 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH3P22223 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH3P22223 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH3P22223 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CDH3P22223 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH3P22223 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH3P22223 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH3P22223 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH3P22223 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDH3P22223 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDH3P22223 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.52■□□□□ 0.07
CDH3P22223 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH3P22223 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH3P22223 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CDH3P22223 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH3P22223 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDH3P22223 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CDH3P22223 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH3P22223 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDH3P22223 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH3P22223 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH3P22223 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH3P22223 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH3P22223 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH3P22223 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH3P22223 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH3P22223 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 AC245100.5-201ENST00000452108 331 ntBASIC15.51■□□□□ 0.07
CDH3P22223 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH3P22223 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH3P22223 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH3P22223 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH3P22223 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH3P22223 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH3P22223 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH3P22223 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH3P22223 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH3P22223 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH3P22223 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH3P22223 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH3P22223 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH3P22223 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH3P22223 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH3P22223 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH3P22223 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 KRT8P12-202ENST00000472924 1397 ntBASIC15.5■□□□□ 0.07
CDH3P22223 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CDH3P22223 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH3P22223 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.5■□□□□ 0.07
CDH3P22223 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms