Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RAB4AP20338 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
RAB4AP20338 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 AC023024.2-201ENST00000623561 1993 ntBASIC12.16□□□□□ -0.46
RAB4AP20338 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
RAB4AP20338 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB4AP20338 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB4AP20338 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB4AP20338 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.16□□□□□ -0.46
RAB4AP20338 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RAB4AP20338 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB4AP20338 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RAB4AP20338 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB4AP20338 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB4AP20338 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
RAB4AP20338 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.16□□□□□ -0.46
RAB4AP20338 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.16□□□□□ -0.46
RAB4AP20338 AL441883.1-201ENST00000566170 1045 ntBASIC12.16□□□□□ -0.46
RAB4AP20338 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.16□□□□□ -0.46
RAB4AP20338 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RAB4AP20338 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RAB4AP20338 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.16□□□□□ -0.46
RAB4AP20338 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
RAB4AP20338 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 AC016027.1-202ENST00000607927 1699 ntBASIC12.16□□□□□ -0.46
RAB4AP20338 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB4AP20338 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
RAB4AP20338 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
RAB4AP20338 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB4AP20338 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 Z83836.1-201ENST00000624605 1642 ntBASIC12.15□□□□□ -0.46
RAB4AP20338 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RAB4AP20338 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
RAB4AP20338 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
RAB4AP20338 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 AC099521.2-201ENST00000619354 2036 ntBASIC12.15□□□□□ -0.46
RAB4AP20338 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
RAB4AP20338 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB4AP20338 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
RAB4AP20338 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
RAB4AP20338 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 AP002414.1-201ENST00000391405 1147 ntBASIC12.15□□□□□ -0.46
RAB4AP20338 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB4AP20338 GUSBP12-201ENST00000513727 720 ntBASIC12.15□□□□□ -0.46
RAB4AP20338 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.15□□□□□ -0.46
RAB4AP20338 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.15□□□□□ -0.46
RAB4AP20338 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB4AP20338 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.15□□□□□ -0.46
RAB4AP20338 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
RAB4AP20338 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB4AP20338 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB4AP20338 AC136621.1-201ENST00000624017 2304 ntBASIC12.15□□□□□ -0.46
RAB4AP20338 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms