Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSMC3P17980 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSMC3P17980 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMC3P17980 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMC3P17980 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PSMC3P17980 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PSMC3P17980 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PSMC3P17980 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.46■□□□□ 0.22
PSMC3P17980 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.45■□□□□ 0.22
PSMC3P17980 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 AC063926.3-201ENST00000624734 5658 ntBASIC16.45■□□□□ 0.22
PSMC3P17980 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.45■□□□□ 0.22
PSMC3P17980 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 ANKRD19P-201ENST00000338192 862 ntBASIC16.45■□□□□ 0.22
PSMC3P17980 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.45■□□□□ 0.22
PSMC3P17980 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PSMC3P17980 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.45■□□□□ 0.22
PSMC3P17980 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.45■□□□□ 0.22
PSMC3P17980 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.45■□□□□ 0.22
PSMC3P17980 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.45■□□□□ 0.22
PSMC3P17980 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.45■□□□□ 0.22
PSMC3P17980 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PSMC3P17980 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.45■□□□□ 0.22
PSMC3P17980 SLC25A47P1-201ENST00000531577 414 ntBASIC16.45■□□□□ 0.22
PSMC3P17980 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PSMC3P17980 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.45■□□□□ 0.22
PSMC3P17980 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.45■□□□□ 0.22
PSMC3P17980 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.45■□□□□ 0.22
PSMC3P17980 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.45■□□□□ 0.22
PSMC3P17980 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.45■□□□□ 0.22
PSMC3P17980 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.45■□□□□ 0.22
PSMC3P17980 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PSMC3P17980 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.45■□□□□ 0.22
PSMC3P17980 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMC3P17980 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.45■□□□□ 0.22
PSMC3P17980 AL592424.1-201ENST00000563624 1536 ntBASIC16.45■□□□□ 0.22
PSMC3P17980 REXO1L6P-201ENST00000603433 1515 ntBASIC16.45■□□□□ 0.22
PSMC3P17980 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PSMC3P17980 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.44■□□□□ 0.22
PSMC3P17980 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.44■□□□□ 0.22
PSMC3P17980 ACTG1P3-201ENST00000431775 1114 ntBASIC16.44■□□□□ 0.22
PSMC3P17980 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PSMC3P17980 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.44■□□□□ 0.22
PSMC3P17980 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.44■□□□□ 0.22
PSMC3P17980 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.44■□□□□ 0.22
PSMC3P17980 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.44■□□□□ 0.22
PSMC3P17980 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.44■□□□□ 0.22
PSMC3P17980 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.44■□□□□ 0.22
PSMC3P17980 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.44■□□□□ 0.22
PSMC3P17980 PAUPAR-201ENST00000630360 2965 ntBASIC16.44■□□□□ 0.22
PSMC3P17980 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.44■□□□□ 0.22
PSMC3P17980 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PSMC3P17980 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PSMC3P17980 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.44■□□□□ 0.22
PSMC3P17980 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.44■□□□□ 0.22
PSMC3P17980 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMC3P17980 HLA-A-202ENST00000376806 1854 ntBASIC16.44■□□□□ 0.22
PSMC3P17980 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PSMC3P17980 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMC3P17980 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMC3P17980 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.43■□□□□ 0.22
PSMC3P17980 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMC3P17980 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PSMC3P17980 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMC3P17980 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PSMC3P17980 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.43■□□□□ 0.22
PSMC3P17980 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.43■□□□□ 0.22
PSMC3P17980 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMC3P17980 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMC3P17980 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms