Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 API5-211ENST00000534695 560 ntTSL 5 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 AC044860.1-202ENST00000559481 777 ntBASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 AC010336.2-201ENST00000564226 506 ntBASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 AC104794.3-201ENST00000566840 1248 ntBASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 AC006449.6-201ENST00000612330 2296 ntBASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 LINC02228-204ENST00000642115 2962 ntBASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 AC138969.3-201ENST00000546612 1459 ntBASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 AC138932.2-201ENST00000548268 1459 ntBASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 AC126755.4-201ENST00000549796 1459 ntBASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 GNAQP1-201ENST00000444815 1067 ntBASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 POU5F1P6-201ENST00000466990 990 ntBASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 AL512361.1-201ENST00000554200 418 ntBASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 ACTG1P22-201ENST00000603793 1099 ntBASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 AC005622.1-201ENST00000636801 1703 ntBASIC15.29■□□□□ 0.04
CCNYL3P0C7X3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 OR8S1-201ENST00000310194 1080 ntBASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 AP006294.1-201ENST00000415407 339 ntBASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 MEP1AP4-201ENST00000423244 1087 ntBASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 AC011495.1-201ENST00000498085 584 ntBASIC15.28■□□□□ 0.04
CCNYL3P0C7X3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms