Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
THBS1P07996 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.52□□□□□ -0.09
THBS1P07996 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
THBS1P07996 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.52□□□□□ -0.09
THBS1P07996 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC14.52□□□□□ -0.09
THBS1P07996 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.52□□□□□ -0.09
THBS1P07996 AL512356.2-201ENST00000546955 174 ntBASIC14.52□□□□□ -0.09
THBS1P07996 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.52□□□□□ -0.09
THBS1P07996 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.52□□□□□ -0.09
THBS1P07996 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
THBS1P07996 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.52□□□□□ -0.09
THBS1P07996 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.52□□□□□ -0.09
THBS1P07996 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
THBS1P07996 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 FLJ16779-201ENST00000612722 7638 ntBASIC14.52□□□□□ -0.09
THBS1P07996 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
THBS1P07996 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.52□□□□□ -0.09
THBS1P07996 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
THBS1P07996 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.51□□□□□ -0.09
THBS1P07996 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.51□□□□□ -0.09
THBS1P07996 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.51□□□□□ -0.09
THBS1P07996 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.51□□□□□ -0.09
THBS1P07996 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.51□□□□□ -0.09
THBS1P07996 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
THBS1P07996 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 TSEN15P1-201ENST00000423257 515 ntBASIC14.51□□□□□ -0.09
THBS1P07996 MTND6P24-201ENST00000440466 518 ntBASIC14.51□□□□□ -0.09
THBS1P07996 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.51□□□□□ -0.09
THBS1P07996 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.51□□□□□ -0.09
THBS1P07996 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.51□□□□□ -0.09
THBS1P07996 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.51□□□□□ -0.09
THBS1P07996 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 MIR4453-201ENST00000584019 89 ntBASIC14.51□□□□□ -0.09
THBS1P07996 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
THBS1P07996 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.51□□□□□ -0.09
THBS1P07996 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.51□□□□□ -0.09
THBS1P07996 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.51□□□□□ -0.09
THBS1P07996 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.51□□□□□ -0.09
THBS1P07996 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.51□□□□□ -0.09
THBS1P07996 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
THBS1P07996 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
THBS1P07996 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.5□□□□□ -0.09
THBS1P07996 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
THBS1P07996 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
THBS1P07996 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.5□□□□□ -0.09
THBS1P07996 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
THBS1P07996 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.5□□□□□ -0.09
THBS1P07996 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
THBS1P07996 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
THBS1P07996 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
THBS1P07996 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms