Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.83■□□□□ 0.13
APOA4P06727 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
APOA4P06727 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
APOA4P06727 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
APOA4P06727 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
APOA4P06727 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.83■□□□□ 0.12
APOA4P06727 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
APOA4P06727 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.83■□□□□ 0.12
APOA4P06727 HLA-J-203ENST00000494367 1087 ntBASIC15.83■□□□□ 0.12
APOA4P06727 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.83■□□□□ 0.12
APOA4P06727 AL512356.2-201ENST00000546955 174 ntBASIC15.83■□□□□ 0.12
APOA4P06727 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.83■□□□□ 0.12
APOA4P06727 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.83■□□□□ 0.12
APOA4P06727 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.83■□□□□ 0.12
APOA4P06727 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
APOA4P06727 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.83■□□□□ 0.12
APOA4P06727 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.83■□□□□ 0.12
APOA4P06727 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.83■□□□□ 0.12
APOA4P06727 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APOA4P06727 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
APOA4P06727 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.82■□□□□ 0.12
APOA4P06727 AC004987.2-201ENST00000395959 1148 ntBASIC15.82■□□□□ 0.12
APOA4P06727 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 AC004449.1-201ENST00000564240 433 ntBASIC15.82■□□□□ 0.12
APOA4P06727 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.82■□□□□ 0.12
APOA4P06727 AC006538.3-201ENST00000612495 578 ntBASIC15.82■□□□□ 0.12
APOA4P06727 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.82■□□□□ 0.12
APOA4P06727 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.82■□□□□ 0.12
APOA4P06727 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.82■□□□□ 0.12
APOA4P06727 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
APOA4P06727 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 AC068418.2-201ENST00000577309 3703 ntBASIC15.82■□□□□ 0.12
APOA4P06727 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.82■□□□□ 0.12
APOA4P06727 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.82■□□□□ 0.12
APOA4P06727 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOA4P06727 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.82■□□□□ 0.12
APOA4P06727 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOA4P06727 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.81■□□□□ 0.12
APOA4P06727 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
APOA4P06727 AC092127.1-201ENST00000567093 3455 ntBASIC15.81■□□□□ 0.12
APOA4P06727 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
APOA4P06727 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.81■□□□□ 0.12
APOA4P06727 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOA4P06727 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOA4P06727 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOA4P06727 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
APOA4P06727 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOA4P06727 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.81■□□□□ 0.12
APOA4P06727 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOA4P06727 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.81■□□□□ 0.12
APOA4P06727 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.81■□□□□ 0.12
APOA4P06727 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOA4P06727 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.81■□□□□ 0.12
APOA4P06727 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.81■□□□□ 0.12
APOA4P06727 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.81■□□□□ 0.12
APOA4P06727 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.81■□□□□ 0.12
APOA4P06727 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOA4P06727 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.81■□□□□ 0.12
APOA4P06727 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOA4P06727 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.81■□□□□ 0.12
APOA4P06727 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOA4P06727 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.81■□□□□ 0.12
APOA4P06727 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms