Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
APOBP04114 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
APOBP04114 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
APOBP04114 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
APOBP04114 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
APOBP04114 AC084364.1-201ENST00000551967 1556 ntBASIC9.53□□□□□ -0.88
APOBP04114 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
APOBP04114 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 RPS9P1-201ENST00000419943 583 ntBASIC9.53□□□□□ -0.88
APOBP04114 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC9.53□□□□□ -0.88
APOBP04114 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
APOBP04114 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC9.53□□□□□ -0.88
APOBP04114 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC9.53□□□□□ -0.88
APOBP04114 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC9.53□□□□□ -0.88
APOBP04114 MIR4522-201ENST00000584932 87 ntBASIC9.53□□□□□ -0.88
APOBP04114 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC9.53□□□□□ -0.88
APOBP04114 AP003392.6-201ENST00000607709 325 ntBASIC9.53□□□□□ -0.88
APOBP04114 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
APOBP04114 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
APOBP04114 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 RN7SL258P-201ENST00000478664 300 ntBASIC9.53□□□□□ -0.88
APOBP04114 RN7SL67P-201ENST00000492147 296 ntBASIC9.53□□□□□ -0.88
APOBP04114 PAM16-211ENST00000575848 518 ntTSL 3 BASIC9.53□□□□□ -0.88
APOBP04114 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC9.53□□□□□ -0.88
APOBP04114 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC9.53□□□□□ -0.88
APOBP04114 AC084781.1-201ENST00000613737 656 ntBASIC9.53□□□□□ -0.88
APOBP04114 AC073911.3-201ENST00000624401 631 ntBASIC9.53□□□□□ -0.88
APOBP04114 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC9.53□□□□□ -0.88
APOBP04114 TBC1D3J-201ENST00000620719 1426 ntBASIC9.53□□□□□ -0.88
APOBP04114 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 AP000356.3-201ENST00000382243 753 ntBASIC9.53□□□□□ -0.88
APOBP04114 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC9.53□□□□□ -0.88
APOBP04114 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC9.53□□□□□ -0.88
APOBP04114 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC9.53□□□□□ -0.88
APOBP04114 RPL18AP3-201ENST00000462885 528 ntBASIC9.53□□□□□ -0.88
APOBP04114 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
APOBP04114 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
APOBP04114 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 AC092364.2-201ENST00000596710 2692 ntBASIC9.53□□□□□ -0.88
APOBP04114 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
APOBP04114 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
APOBP04114 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
APOBP04114 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
APOBP04114 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
APOBP04114 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC9.52□□□□□ -0.88
APOBP04114 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC9.52□□□□□ -0.88
APOBP04114 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
APOBP04114 MST1L-201ENST00000442552 2185 ntBASIC9.52□□□□□ -0.88
APOBP04114 AL157791.1-201ENST00000553667 1699 ntBASIC9.52□□□□□ -0.88
APOBP04114 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
APOBP04114 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC9.52□□□□□ -0.88
APOBP04114 AL031713.1-201ENST00000564813 661 ntBASIC9.52□□□□□ -0.88
APOBP04114 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
APOBP04114 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC9.52□□□□□ -0.88
APOBP04114 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
APOBP04114 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC9.52□□□□□ -0.89
APOBP04114 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC9.52□□□□□ -0.89
APOBP04114 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC9.52□□□□□ -0.89
APOBP04114 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 LRRC59-203ENST00000576448 1531 ntBASIC9.52□□□□□ -0.89
APOBP04114 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 HNRNPA1P41-201ENST00000397777 928 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms