Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DRAP01903 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DRAP01903 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DRAP01903 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DRAP01903 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DRAP01903 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DRAP01903 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DRAP01903 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DRAP01903 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 AC073347.1-201ENST00000421633 2643 ntBASIC16.9■□□□□ 0.3
HLA-DRAP01903 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 BCRP1-201ENST00000444246 691 ntBASIC16.9■□□□□ 0.3
HLA-DRAP01903 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 SPCS2P1-201ENST00000561636 679 ntBASIC16.9■□□□□ 0.3
HLA-DRAP01903 AJ011932.1-201ENST00000621707 465 ntBASIC16.9■□□□□ 0.3
HLA-DRAP01903 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DRAP01903 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DRAP01903 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.89■□□□□ 0.3
HLA-DRAP01903 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DRAP01903 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DRAP01903 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DRAP01903 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DRAP01903 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DRAP01903 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DRAP01903 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DRAP01903 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DRAP01903 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DRAP01903 AC092384.3-202ENST00000564646 2873 ntBASIC16.88■□□□□ 0.29
HLA-DRAP01903 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DRAP01903 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DRAP01903 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DRAP01903 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DRAP01903 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DRAP01903 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
HLA-DRAP01903 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DRAP01903 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DRAP01903 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms