Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MT-CO1P00395 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MT-CO1P00395 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
MT-CO1P00395 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
MT-CO1P00395 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.17■□□□□ 0.18
MT-CO1P00395 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.17■□□□□ 0.18
MT-CO1P00395 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MT-CO1P00395 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.17■□□□□ 0.18
MT-CO1P00395 AL132655.2-201ENST00000596276 594 ntBASIC16.17■□□□□ 0.18
MT-CO1P00395 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
MT-CO1P00395 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-CO1P00395 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
MT-CO1P00395 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 AC011477.6-201ENST00000604980 1927 ntBASIC16.17■□□□□ 0.18
MT-CO1P00395 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-CO1P00395 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MT-CO1P00395 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MT-CO1P00395 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.17■□□□□ 0.18
MT-CO1P00395 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MT-CO1P00395 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MT-CO1P00395 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-CO1P00395 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-CO1P00395 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MT-CO1P00395 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MT-CO1P00395 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-CO1P00395 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-CO1P00395 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MT-CO1P00395 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-CO1P00395 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-CO1P00395 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-CO1P00395 API5-211ENST00000534695 560 ntTSL 5 BASIC16.16■□□□□ 0.18
MT-CO1P00395 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-CO1P00395 HNRNPUP1-201ENST00000554987 333 ntBASIC16.16■□□□□ 0.18
MT-CO1P00395 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-CO1P00395 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MT-CO1P00395 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 AC097359.3-201ENST00000603982 1210 ntBASIC16.16■□□□□ 0.18
MT-CO1P00395 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.16■□□□□ 0.18
MT-CO1P00395 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 AL662799.1-202ENST00000614205 422 ntBASIC16.16■□□□□ 0.18
MT-CO1P00395 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-CO1P00395 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
MT-CO1P00395 AC112504.1-201ENST00000623415 1841 ntBASIC16.16■□□□□ 0.18
MT-CO1P00395 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 PKD1P5-201ENST00000532415 10291 ntBASIC16.16■□□□□ 0.18
MT-CO1P00395 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-CO1P00395 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-CO1P00395 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-CO1P00395 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
MT-CO1P00395 AC063926.3-201ENST00000624734 5658 ntBASIC16.15■□□□□ 0.18
MT-CO1P00395 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-CO1P00395 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-CO1P00395 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-CO1P00395 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-CO1P00395 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-CO1P00395 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MT-CO1P00395 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-CO1P00395 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-CO1P00395 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-CO1P00395 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-CO1P00395 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MT-CO1P00395 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.15■□□□□ 0.18
MT-CO1P00395 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MT-CO1P00395 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.15■□□□□ 0.18
MT-CO1P00395 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-CO1P00395 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.15■□□□□ 0.18
MT-CO1P00395 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.15■□□□□ 0.18
MT-CO1P00395 AC023310.3-201ENST00000557027 670 ntBASIC16.15■□□□□ 0.18
MT-CO1P00395 AC100756.1-201ENST00000562736 682 ntBASIC16.15■□□□□ 0.18
MT-CO1P00395 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.15■□□□□ 0.18
MT-CO1P00395 AC138749.3-201ENST00000567691 622 ntBASIC16.15■□□□□ 0.18
MT-CO1P00395 AC092337.1-201ENST00000568699 1129 ntBASIC16.15■□□□□ 0.18
MT-CO1P00395 SPDYE22P-201ENST00000582158 798 ntBASIC16.15■□□□□ 0.18
MT-CO1P00395 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-CO1P00395 AC116165.1-201ENST00000611806 668 ntBASIC16.15■□□□□ 0.18
MT-CO1P00395 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
MT-CO1P00395 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-CO1P00395 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.15■□□□□ 0.18
MT-CO1P00395 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms