Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RTN3O95197 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.62■□□□□ 0.25
RTN3O95197 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.62■□□□□ 0.25
RTN3O95197 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.62■□□□□ 0.25
RTN3O95197 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RTN3O95197 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.62■□□□□ 0.25
RTN3O95197 TOMM22P5-201ENST00000416399 439 ntBASIC16.62■□□□□ 0.25
RTN3O95197 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.62■□□□□ 0.25
RTN3O95197 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.62■□□□□ 0.25
RTN3O95197 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.62■□□□□ 0.25
RTN3O95197 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.62■□□□□ 0.25
RTN3O95197 CHCHD2P3-201ENST00000603038 451 ntBASIC16.62■□□□□ 0.25
RTN3O95197 AC093726.1-201ENST00000608064 963 ntBASIC16.62■□□□□ 0.25
RTN3O95197 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.62■□□□□ 0.25
RTN3O95197 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RTN3O95197 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.62■□□□□ 0.25
RTN3O95197 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.62■□□□□ 0.25
RTN3O95197 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.62■□□□□ 0.25
RTN3O95197 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RTN3O95197 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RTN3O95197 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.62■□□□□ 0.25
RTN3O95197 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.62■□□□□ 0.25
RTN3O95197 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN3O95197 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN3O95197 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 AC098614.1-201ENST00000368528 745 ntBASIC16.61■□□□□ 0.25
RTN3O95197 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.61■□□□□ 0.25
RTN3O95197 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.61■□□□□ 0.25
RTN3O95197 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN3O95197 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.61■□□□□ 0.25
RTN3O95197 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RTN3O95197 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN3O95197 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN3O95197 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.61■□□□□ 0.25
RTN3O95197 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.61■□□□□ 0.25
RTN3O95197 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.61■□□□□ 0.25
RTN3O95197 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.61■□□□□ 0.25
RTN3O95197 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.61■□□□□ 0.25
RTN3O95197 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN3O95197 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RTN3O95197 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 AC007431.3-201ENST00000623221 587 ntBASIC16.61■□□□□ 0.25
RTN3O95197 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.61■□□□□ 0.25
RTN3O95197 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.61■□□□□ 0.25
RTN3O95197 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN3O95197 AC063926.2-201ENST00000623766 1308 ntBASIC16.61■□□□□ 0.25
RTN3O95197 AC092384.3-202ENST00000564646 2873 ntBASIC16.61■□□□□ 0.25
RTN3O95197 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
RTN3O95197 PAUPAR-201ENST00000630360 2965 ntBASIC16.61■□□□□ 0.25
RTN3O95197 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.61■□□□□ 0.25
RTN3O95197 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.61■□□□□ 0.25
RTN3O95197 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RTN3O95197 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN3O95197 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN3O95197 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN3O95197 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN3O95197 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
RTN3O95197 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.6■□□□□ 0.25
RTN3O95197 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.6■□□□□ 0.25
RTN3O95197 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.6■□□□□ 0.25
RTN3O95197 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN3O95197 FAM45BP-202ENST00000592932 1624 ntBASIC16.6■□□□□ 0.25
RTN3O95197 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms