Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.37■□□□□ 0.21
LRCH4O75427 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.37■□□□□ 0.21
LRCH4O75427 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.37■□□□□ 0.21
LRCH4O75427 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 LINC01115-203ENST00000606068 577 ntBASIC16.37■□□□□ 0.21
LRCH4O75427 AL844908.2-201ENST00000609461 460 ntBASIC16.37■□□□□ 0.21
LRCH4O75427 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.37■□□□□ 0.21
LRCH4O75427 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.37■□□□□ 0.21
LRCH4O75427 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.37■□□□□ 0.21
LRCH4O75427 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.37■□□□□ 0.21
LRCH4O75427 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.37■□□□□ 0.21
LRCH4O75427 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
LRCH4O75427 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.37■□□□□ 0.21
LRCH4O75427 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 TNRC18P2-201ENST00000417666 2714 ntBASIC16.37■□□□□ 0.21
LRCH4O75427 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.37■□□□□ 0.21
LRCH4O75427 AC006058.4-201ENST00000624016 1670 ntBASIC16.37■□□□□ 0.21
LRCH4O75427 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRCH4O75427 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.36■□□□□ 0.21
LRCH4O75427 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.36■□□□□ 0.21
LRCH4O75427 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH4O75427 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH4O75427 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRCH4O75427 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH4O75427 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH4O75427 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.36■□□□□ 0.21
LRCH4O75427 AF228730.6-201ENST00000641497 218 ntBASIC16.36■□□□□ 0.21
LRCH4O75427 AC084121.3-201ENST00000641716 218 ntBASIC16.36■□□□□ 0.21
LRCH4O75427 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 AC087499.5-201ENST00000452760 1342 ntBASIC16.36■□□□□ 0.21
LRCH4O75427 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRCH4O75427 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRCH4O75427 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.36■□□□□ 0.21
LRCH4O75427 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRCH4O75427 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH4O75427 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 MST1L-201ENST00000442552 2185 ntBASIC16.36■□□□□ 0.21
LRCH4O75427 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH4O75427 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.35■□□□□ 0.21
LRCH4O75427 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LRCH4O75427 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.35■□□□□ 0.21
LRCH4O75427 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.35■□□□□ 0.21
LRCH4O75427 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.35■□□□□ 0.21
LRCH4O75427 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.35■□□□□ 0.21
LRCH4O75427 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRCH4O75427 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.35■□□□□ 0.21
LRCH4O75427 AC074044.1-201ENST00000609673 707 ntBASIC16.35■□□□□ 0.21
LRCH4O75427 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms