Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZNF253O75346 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
ZNF253O75346 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.35□□□□□ -0.43
ZNF253O75346 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.35□□□□□ -0.43
ZNF253O75346 AC018712.1-201ENST00000455767 687 ntBASIC12.35□□□□□ -0.43
ZNF253O75346 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.35□□□□□ -0.43
ZNF253O75346 KRT18P34-201ENST00000488218 1270 ntBASIC12.35□□□□□ -0.43
ZNF253O75346 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.35□□□□□ -0.43
ZNF253O75346 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 AC004790.2-201ENST00000623588 572 ntBASIC12.35□□□□□ -0.43
ZNF253O75346 TP73-AS1-207ENST00000624167 988 ntBASIC12.35□□□□□ -0.43
ZNF253O75346 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 AC020658.6-201ENST00000623564 1870 ntBASIC12.35□□□□□ -0.43
ZNF253O75346 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.35□□□□□ -0.43
ZNF253O75346 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF253O75346 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 AP003680.1-201ENST00000598970 3660 ntBASIC12.35□□□□□ -0.43
ZNF253O75346 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.35□□□□□ -0.43
ZNF253O75346 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF253O75346 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF253O75346 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.34□□□□□ -0.43
ZNF253O75346 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
ZNF253O75346 AP001282.1-201ENST00000531301 1499 ntBASIC12.34□□□□□ -0.43
ZNF253O75346 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ZNF253O75346 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ZNF253O75346 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.34□□□□□ -0.43
ZNF253O75346 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.34□□□□□ -0.43
ZNF253O75346 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 AF186996.4-201ENST00000467186 377 ntBASIC12.34□□□□□ -0.43
ZNF253O75346 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.34□□□□□ -0.43
ZNF253O75346 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms