Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.06■□□□□ 0
LCMT2O60294 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.06■□□□□ 0
LCMT2O60294 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.06■□□□□ 0
LCMT2O60294 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.06■□□□□ 0
LCMT2O60294 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LCMT2O60294 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.06■□□□□ 0
LCMT2O60294 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.06■□□□□ 0
LCMT2O60294 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 AC015922.1-201ENST00000421102 1152 ntBASIC15.06■□□□□ 0
LCMT2O60294 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
LCMT2O60294 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.06■□□□□ 0
LCMT2O60294 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.06■□□□□ 0
LCMT2O60294 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.06■□□□□ 0
LCMT2O60294 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 SLED1-202ENST00000512051 380 ntBASIC15.06■□□□□ 0
LCMT2O60294 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.06■□□□□ 0
LCMT2O60294 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.06■□□□□ 0
LCMT2O60294 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.06■□□□□ 0
LCMT2O60294 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.06■□□□□ 0
LCMT2O60294 AC011467.4-201ENST00000594891 528 ntBASIC15.06■□□□□ 0
LCMT2O60294 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.06■□□□□ 0
LCMT2O60294 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.06■□□□□ 0
LCMT2O60294 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.06■□□□□ 0
LCMT2O60294 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.06■□□□□ 0
LCMT2O60294 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.06■□□□□ 0
LCMT2O60294 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.06■□□□□ 0
LCMT2O60294 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LCMT2O60294 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.06■□□□□ 0
LCMT2O60294 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.06■□□□□ 0
LCMT2O60294 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LCMT2O60294 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LCMT2O60294 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
LCMT2O60294 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
LCMT2O60294 SSR4P1-203ENST00000599569 2260 ntBASIC15.05■□□□□ 0
LCMT2O60294 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.05■□□□□ 0
LCMT2O60294 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
LCMT2O60294 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LCMT2O60294 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.05■□□□□ 0
LCMT2O60294 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
LCMT2O60294 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.05■□□□□ 0
LCMT2O60294 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.05■□□□□ -0
LCMT2O60294 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 TOMM22P5-201ENST00000416399 439 ntBASIC15.05■□□□□ -0
LCMT2O60294 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.05■□□□□ -0
LCMT2O60294 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.05■□□□□ -0
LCMT2O60294 GNAQP1-201ENST00000444815 1067 ntBASIC15.05■□□□□ -0
LCMT2O60294 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LCMT2O60294 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.05■□□□□ -0
LCMT2O60294 TIMM17BP1-201ENST00000545713 516 ntBASIC15.05■□□□□ -0
LCMT2O60294 AC104794.3-201ENST00000566840 1248 ntBASIC15.05■□□□□ -0
LCMT2O60294 AC092337.1-201ENST00000568699 1129 ntBASIC15.05■□□□□ -0
LCMT2O60294 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.05■□□□□ -0
LCMT2O60294 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.05■□□□□ -0
LCMT2O60294 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.05■□□□□ -0
LCMT2O60294 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.05■□□□□ -0
LCMT2O60294 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LCMT2O60294 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LCMT2O60294 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.05■□□□□ -0
LCMT2O60294 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.04■□□□□ -0
LCMT2O60294 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms