Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MIR4321-201ENST00000592276 80 ntBASIC12.92□□□□□ -0.34
SSSCA1O60232 AC025062.2-201ENST00000605477 670 ntBASIC12.92□□□□□ -0.34
SSSCA1O60232 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.92□□□□□ -0.34
SSSCA1O60232 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.92□□□□□ -0.34
SSSCA1O60232 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SSSCA1O60232 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.92□□□□□ -0.34
SSSCA1O60232 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SSSCA1O60232 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SSSCA1O60232 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.91□□□□□ -0.34
SSSCA1O60232 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.91□□□□□ -0.34
SSSCA1O60232 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.91□□□□□ -0.34
SSSCA1O60232 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.91□□□□□ -0.34
SSSCA1O60232 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 AC018892.3-201ENST00000623986 2499 ntBASIC12.91□□□□□ -0.34
SSSCA1O60232 INTS4P1-203ENST00000641008 3683 ntBASIC12.91□□□□□ -0.34
SSSCA1O60232 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.91□□□□□ -0.34
SSSCA1O60232 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSSCA1O60232 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.91□□□□□ -0.34
SSSCA1O60232 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SSSCA1O60232 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.9□□□□□ -0.34
SSSCA1O60232 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.9□□□□□ -0.34
SSSCA1O60232 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.9□□□□□ -0.34
SSSCA1O60232 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.9□□□□□ -0.34
SSSCA1O60232 HMGA1P7-201ENST00000406908 502 ntBASIC12.9□□□□□ -0.34
SSSCA1O60232 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms