Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 AC112504.1-201ENST00000623415 1841 ntBASIC15.26■□□□□ 0.03
SLC28A2O43868 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC28A2O43868 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC28A2O43868 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC28A2O43868 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC28A2O43868 AC069224.1-201ENST00000566372 1715 ntBASIC15.26■□□□□ 0.03
SLC28A2O43868 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 AL391825.1-201ENST00000457671 1364 ntBASIC15.25■□□□□ 0.03
SLC28A2O43868 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC28A2O43868 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC28A2O43868 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC28A2O43868 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC28A2O43868 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLC28A2O43868 MIR346-201ENST00000362234 95 ntBASIC15.25■□□□□ 0.03
SLC28A2O43868 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
SLC28A2O43868 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SLC28A2O43868 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC28A2O43868 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC28A2O43868 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC28A2O43868 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC28A2O43868 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.25■□□□□ 0.03
SLC28A2O43868 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A2O43868 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A2O43868 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC28A2O43868 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
SLC28A2O43868 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SLC28A2O43868 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC28A2O43868 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 AP005117.1-202ENST00000581724 1908 ntBASIC15.24■□□□□ 0.03
SLC28A2O43868 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC28A2O43868 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC28A2O43868 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 AC092506.1-202ENST00000401022 528 ntBASIC15.24■□□□□ 0.03
SLC28A2O43868 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC28A2O43868 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC28A2O43868 GNAQP1-201ENST00000444815 1067 ntBASIC15.24■□□□□ 0.03
SLC28A2O43868 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC28A2O43868 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC28A2O43868 KRT18P34-201ENST00000488218 1270 ntBASIC15.24■□□□□ 0.03
SLC28A2O43868 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.24■□□□□ 0.03
SLC28A2O43868 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC28A2O43868 WASH4P-201ENST00000564273 1246 ntBASIC15.24■□□□□ 0.03
SLC28A2O43868 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.24■□□□□ 0.03
SLC28A2O43868 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC28A2O43868 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC28A2O43868 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC28A2O43868 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC28A2O43868 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SLC28A2O43868 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.24■□□□□ 0.03
SLC28A2O43868 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms