Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SMAD6O43541 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.84■□□□□ 0.13
SMAD6O43541 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.84■□□□□ 0.13
SMAD6O43541 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMAD6O43541 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.83■□□□□ 0.13
SMAD6O43541 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SMAD6O43541 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMAD6O43541 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.83■□□□□ 0.13
SMAD6O43541 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.83■□□□□ 0.13
SMAD6O43541 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMAD6O43541 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SMAD6O43541 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.83■□□□□ 0.12
SMAD6O43541 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.83■□□□□ 0.12
SMAD6O43541 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMAD6O43541 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMAD6O43541 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMAD6O43541 AC134915.1-201ENST00000426461 574 ntBASIC15.83■□□□□ 0.12
SMAD6O43541 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.83■□□□□ 0.12
SMAD6O43541 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.83■□□□□ 0.12
SMAD6O43541 GIMAP3P-201ENST00000495150 836 ntBASIC15.83■□□□□ 0.12
SMAD6O43541 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.83■□□□□ 0.12
SMAD6O43541 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.83■□□□□ 0.12
SMAD6O43541 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMAD6O43541 AC124283.3-201ENST00000570869 594 ntBASIC15.83■□□□□ 0.12
SMAD6O43541 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.83■□□□□ 0.12
SMAD6O43541 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
SMAD6O43541 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMAD6O43541 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.83■□□□□ 0.12
SMAD6O43541 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SMAD6O43541 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMAD6O43541 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SMAD6O43541 INTS4P2-202ENST00000614726 2019 ntBASIC15.83■□□□□ 0.12
SMAD6O43541 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMAD6O43541 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SMAD6O43541 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SMAD6O43541 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SMAD6O43541 AC007950.2-201ENST00000615045 2347 ntBASIC15.83■□□□□ 0.12
SMAD6O43541 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMAD6O43541 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.83■□□□□ 0.12
SMAD6O43541 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMAD6O43541 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMAD6O43541 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMAD6O43541 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.82■□□□□ 0.12
SMAD6O43541 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.82■□□□□ 0.12
SMAD6O43541 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.82■□□□□ 0.12
SMAD6O43541 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SMAD6O43541 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.82■□□□□ 0.12
SMAD6O43541 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.82■□□□□ 0.12
SMAD6O43541 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.82■□□□□ 0.12
SMAD6O43541 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.82■□□□□ 0.12
SMAD6O43541 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SMAD6O43541 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.82■□□□□ 0.12
SMAD6O43541 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SMAD6O43541 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.82■□□□□ 0.12
SMAD6O43541 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.82■□□□□ 0.12
SMAD6O43541 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 AC120045.2-201ENST00000567334 178 ntBASIC15.82■□□□□ 0.12
SMAD6O43541 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.82■□□□□ 0.12
SMAD6O43541 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.82■□□□□ 0.12
SMAD6O43541 AC133539.2-201ENST00000604757 467 ntBASIC15.82■□□□□ 0.12
SMAD6O43541 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.82■□□□□ 0.12
SMAD6O43541 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SMAD6O43541 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.82■□□□□ 0.12
SMAD6O43541 AC132872.4-202ENST00000622924 2756 ntBASIC15.82■□□□□ 0.12
SMAD6O43541 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.82■□□□□ 0.12
SMAD6O43541 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SMAD6O43541 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SMAD6O43541 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMAD6O43541 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SMAD6O43541 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.82■□□□□ 0.12
SMAD6O43541 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SMAD6O43541 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.81■□□□□ 0.12
SMAD6O43541 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.81■□□□□ 0.12
SMAD6O43541 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SMAD6O43541 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.81■□□□□ 0.12
SMAD6O43541 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SMAD6O43541 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms