Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2A1O14983 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A1O14983 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ATP2A1O14983 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A1O14983 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A1O14983 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A1O14983 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2A1O14983 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP2A1O14983 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP2A1O14983 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ATP2A1O14983 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A1O14983 AC022494.1-201ENST00000466044 728 ntBASIC17.95■□□□□ 0.46
ATP2A1O14983 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.95■□□□□ 0.46
ATP2A1O14983 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP2A1O14983 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2A1O14983 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2A1O14983 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ATP2A1O14983 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
ATP2A1O14983 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2A1O14983 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
ATP2A1O14983 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2A1O14983 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A1O14983 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ATP2A1O14983 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATP2A1O14983 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
ATP2A1O14983 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATP2A1O14983 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.94■□□□□ 0.46
ATP2A1O14983 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ATP2A1O14983 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ATP2A1O14983 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
ATP2A1O14983 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.94■□□□□ 0.46
ATP2A1O14983 CSF2RBP1-201ENST00000447905 391 ntBASIC17.94■□□□□ 0.46
ATP2A1O14983 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ATP2A1O14983 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ATP2A1O14983 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ATP2A1O14983 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ATP2A1O14983 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ATP2A1O14983 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2A1O14983 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A1O14983 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
ATP2A1O14983 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 REXO1L6P-201ENST00000603433 1515 ntBASIC17.93■□□□□ 0.46
ATP2A1O14983 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ATP2A1O14983 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ATP2A1O14983 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ATP2A1O14983 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ATP2A1O14983 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.93■□□□□ 0.46
ATP2A1O14983 AC016694.1-201ENST00000434179 700 ntBASIC17.93■□□□□ 0.46
ATP2A1O14983 FTH1P14-201ENST00000482930 551 ntBASIC17.93■□□□□ 0.46
ATP2A1O14983 AC106760.1-201ENST00000508690 800 ntBASIC17.93■□□□□ 0.46
ATP2A1O14983 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ATP2A1O14983 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.93■□□□□ 0.46
ATP2A1O14983 GNRHR2-203ENST00000581100 1187 ntBASIC17.93■□□□□ 0.46
ATP2A1O14983 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.93■□□□□ 0.46
ATP2A1O14983 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A1O14983 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.93■□□□□ 0.46
ATP2A1O14983 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ATP2A1O14983 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A1O14983 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ATP2A1O14983 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A1O14983 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.93■□□□□ 0.46
ATP2A1O14983 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ATP2A1O14983 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP2A1O14983 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP2A1O14983 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP2A1O14983 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP2A1O14983 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP2A1O14983 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms