Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC140479.7-201ENST00000636301 2332 ntBASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC009090.5-201ENST00000624886 2285 ntBASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC067930.6-201ENST00000623257 4947 ntBASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 RPS8P6-201ENST00000426177 609 ntBASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC009078.2-202ENST00000463353 338 ntBASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL513190.1-201ENST00000621254 727 ntBASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC008267.7-201ENST00000624570 1194 ntBASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-7A0A0A0MS04 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
TRBV6-7A0A0A0MS04 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC127383.1-201ENST00000444697 1800 ntBASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 RPL13AP23-201ENST00000480739 586 ntBASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms