Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 AC003101.2-201ENST00000612557 442 ntBASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 REXO1L1P-202ENST00000608646 1974 ntBASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 RPS8P6-201ENST00000426177 609 ntBASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 SNHG9-202ENST00000564014 471 ntBASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 LTF-203ENST00000426532 2494 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AC092850.2-201ENST00000623821 2697 ntBASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 AL136982.4-201ENST00000437689 1740 ntBASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.49□□□□□ -0.57
TRGV1A0A0A0MS02 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms