Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 C2orf69P2-201ENST00000562032 1123 ntBASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 AC138951.2-201ENST00000623455 1161 ntBASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 FAM197Y7-201ENST00000432892 766 ntBASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 AP001258.2-201ENST00000529891 490 ntBASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC187A0A096LP49 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 ZNF767P-206ENST00000513792 565 ntBASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 AC078819.1-201ENST00000547454 765 ntBASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 AC012085.1-201ENST00000548270 765 ntBASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 AC132938.4-201ENST00000623835 848 ntBASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms