Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC004987.1-201ENST00000428627 508 ntBASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 ATP5G2P3-201ENST00000429083 425 ntBASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 DUX4L18-201ENST00000553347 1267 ntBASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 AC133561.1-201ENST00000568600 2415 ntBASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 AC139795.1-202ENST00000500444 432 ntBASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 AC012354.3-201ENST00000623734 483 ntBASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DRB4X5D2U9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-DRB4X5D2U9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-DRB4X5D2U9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 AC079834.2-201ENST00000609776 1949 ntBASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 TSPY13P-201ENST00000338964 914 ntBASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 AP003733.4-201ENST00000623785 1697 ntBASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 AC138932.3-201ENST00000567634 1902 ntBASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DRB4X5D2U9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRB4X5D2U9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRB4X5D2U9 LONRF2P2-201ENST00000439212 571 ntBASIC17.44■□□□□ 0.38
HLA-DRB4X5D2U9 MIR6089-201ENST00000616698 64 ntBASIC17.44■□□□□ 0.38
HLA-DRB4X5D2U9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HLA-DRB4X5D2U9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DRB4X5D2U9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DRB4X5D2U9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HLA-DRB4X5D2U9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DRB4X5D2U9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 AL592295.1-201ENST00000400984 884 ntBASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DRB4X5D2U9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DRB4X5D2U9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DRB4X5D2U9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DRB4X5D2U9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DRB4X5D2U9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DRB4X5D2U9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DRB4X5D2U9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HLA-DRB4X5D2U9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DRB4X5D2U9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DRB4X5D2U9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 AC019171.1-201ENST00000601251 1056 ntBASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 BHLHE23-202ENST00000612929 1109 ntBASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 AC074183.2-201ENST00000623112 922 ntBASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRB4X5D2U9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.39■□□□□ 0.38
HLA-DRB4X5D2U9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.39■□□□□ 0.38
HLA-DRB4X5D2U9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms