Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
TNFRSF11AQ9Y6Q6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.84■■■□□ 2.21
TNFRSF11AQ9Y6Q6 AC011551.1-201ENST00000614101 683 ntBASIC28.84■■■□□ 2.21
TNFRSF11AQ9Y6Q6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
TNFRSF11AQ9Y6Q6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.84■■■□□ 2.21
TNFRSF11AQ9Y6Q6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.84■■■□□ 2.21
TNFRSF11AQ9Y6Q6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
TNFRSF11AQ9Y6Q6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC28.83■■■□□ 2.21
TNFRSF11AQ9Y6Q6 GUSBP5-201ENST00000418136 578 ntBASIC28.83■■■□□ 2.21
TNFRSF11AQ9Y6Q6 AC137630.3-201ENST00000607245 391 ntBASIC28.83■■■□□ 2.21
TNFRSF11AQ9Y6Q6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TNFRSF11AQ9Y6Q6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
TNFRSF11AQ9Y6Q6 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.82■■■□□ 2.2
TNFRSF11AQ9Y6Q6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.82■■■□□ 2.2
TNFRSF11AQ9Y6Q6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.82■■■□□ 2.2
TNFRSF11AQ9Y6Q6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.82■■■□□ 2.2
TNFRSF11AQ9Y6Q6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.82■■■□□ 2.2
TNFRSF11AQ9Y6Q6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
TNFRSF11AQ9Y6Q6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TNFRSF11AQ9Y6Q6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TNFRSF11AQ9Y6Q6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TNFRSF11AQ9Y6Q6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TNFRSF11AQ9Y6Q6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TNFRSF11AQ9Y6Q6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.8■■■□□ 2.2
TNFRSF11AQ9Y6Q6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TNFRSF11AQ9Y6Q6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.8■■■□□ 2.2
TNFRSF11AQ9Y6Q6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.8■■■□□ 2.2
TNFRSF11AQ9Y6Q6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.8■■■□□ 2.2
TNFRSF11AQ9Y6Q6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TNFRSF11AQ9Y6Q6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
TNFRSF11AQ9Y6Q6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
TNFRSF11AQ9Y6Q6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.79■■■□□ 2.2
TNFRSF11AQ9Y6Q6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
TNFRSF11AQ9Y6Q6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.78■■■□□ 2.2
TNFRSF11AQ9Y6Q6 MIR6089-201ENST00000616698 64 ntBASIC28.78■■■□□ 2.2
TNFRSF11AQ9Y6Q6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
TNFRSF11AQ9Y6Q6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.78■■■□□ 2.2
TNFRSF11AQ9Y6Q6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
TNFRSF11AQ9Y6Q6 AC138932.3-201ENST00000567634 1902 ntBASIC28.78■■■□□ 2.2
TNFRSF11AQ9Y6Q6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
TNFRSF11AQ9Y6Q6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
TNFRSF11AQ9Y6Q6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.78■■■□□ 2.2
TNFRSF11AQ9Y6Q6 AC021242.3-201ENST00000607598 1377 ntBASIC28.77■■■□□ 2.2
TNFRSF11AQ9Y6Q6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TNFRSF11AQ9Y6Q6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TNFRSF11AQ9Y6Q6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TNFRSF11AQ9Y6Q6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TNFRSF11AQ9Y6Q6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.77■■■□□ 2.2
TNFRSF11AQ9Y6Q6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
TNFRSF11AQ9Y6Q6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TNFRSF11AQ9Y6Q6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.75■■■□□ 2.19
TNFRSF11AQ9Y6Q6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.75■■■□□ 2.19
TNFRSF11AQ9Y6Q6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.75■■■□□ 2.19
TNFRSF11AQ9Y6Q6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TNFRSF11AQ9Y6Q6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
TNFRSF11AQ9Y6Q6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TNFRSF11AQ9Y6Q6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TNFRSF11AQ9Y6Q6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.74■■■□□ 2.19
TNFRSF11AQ9Y6Q6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
TNFRSF11AQ9Y6Q6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
TNFRSF11AQ9Y6Q6 Z92544.1-202ENST00000571933 1220 ntBASIC28.74■■■□□ 2.19
TNFRSF11AQ9Y6Q6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.74■■■□□ 2.19
TNFRSF11AQ9Y6Q6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TNFRSF11AQ9Y6Q6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TNFRSF11AQ9Y6Q6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TNFRSF11AQ9Y6Q6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TNFRSF11AQ9Y6Q6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
TNFRSF11AQ9Y6Q6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
TNFRSF11AQ9Y6Q6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
TNFRSF11AQ9Y6Q6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.72■■■□□ 2.19
TNFRSF11AQ9Y6Q6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
TNFRSF11AQ9Y6Q6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
TNFRSF11AQ9Y6Q6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TNFRSF11AQ9Y6Q6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.71■■■□□ 2.19
TNFRSF11AQ9Y6Q6 MIR4787-201ENST00000607364 84 ntBASIC28.71■■■□□ 2.19
TNFRSF11AQ9Y6Q6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TNFRSF11AQ9Y6Q6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
TNFRSF11AQ9Y6Q6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
TNFRSF11AQ9Y6Q6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
TNFRSF11AQ9Y6Q6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.7■■■□□ 2.18
TNFRSF11AQ9Y6Q6 UNC93B8-201ENST00000511903 705 ntBASIC28.7■■■□□ 2.18
TNFRSF11AQ9Y6Q6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
TNFRSF11AQ9Y6Q6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
TNFRSF11AQ9Y6Q6 BX664725.1-201ENST00000438252 379 ntBASIC28.69■■■□□ 2.18
TNFRSF11AQ9Y6Q6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.69■■■□□ 2.18
TNFRSF11AQ9Y6Q6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TNFRSF11AQ9Y6Q6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
TNFRSF11AQ9Y6Q6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
TNFRSF11AQ9Y6Q6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
TNFRSF11AQ9Y6Q6 AC135731.1-201ENST00000569415 2548 ntBASIC28.68■■■□□ 2.18
TNFRSF11AQ9Y6Q6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
TNFRSF11AQ9Y6Q6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
TNFRSF11AQ9Y6Q6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TNFRSF11AQ9Y6Q6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.67■■■□□ 2.18
TNFRSF11AQ9Y6Q6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.67■■■□□ 2.18
TNFRSF11AQ9Y6Q6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.67■■■□□ 2.18
TNFRSF11AQ9Y6Q6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
TNFRSF11AQ9Y6Q6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.67■■■□□ 2.18
TNFRSF11AQ9Y6Q6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.67■■■□□ 2.18
TNFRSF11AQ9Y6Q6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms