Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM2Q9Y333 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM2Q9Y333 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.8■□□□□ 0.92
LSM2Q9Y333 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LSM2Q9Y333 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM2Q9Y333 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM2Q9Y333 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM2Q9Y333 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.8■□□□□ 0.92
LSM2Q9Y333 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.8■□□□□ 0.92
LSM2Q9Y333 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.8■□□□□ 0.92
LSM2Q9Y333 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LSM2Q9Y333 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LSM2Q9Y333 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LSM2Q9Y333 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LSM2Q9Y333 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LSM2Q9Y333 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.79■□□□□ 0.92
LSM2Q9Y333 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LSM2Q9Y333 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
LSM2Q9Y333 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
LSM2Q9Y333 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.78■□□□□ 0.92
LSM2Q9Y333 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LSM2Q9Y333 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
LSM2Q9Y333 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LSM2Q9Y333 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LSM2Q9Y333 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LSM2Q9Y333 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LSM2Q9Y333 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LSM2Q9Y333 AC233723.2-201ENST00000623798 2106 ntBASIC20.77■□□□□ 0.92
LSM2Q9Y333 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LSM2Q9Y333 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.77■□□□□ 0.92
LSM2Q9Y333 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LSM2Q9Y333 EP400NL-214ENST00000641289 2402 ntBASIC20.77■□□□□ 0.92
LSM2Q9Y333 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LSM2Q9Y333 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LSM2Q9Y333 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.77■□□□□ 0.92
LSM2Q9Y333 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LSM2Q9Y333 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
LSM2Q9Y333 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LSM2Q9Y333 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LSM2Q9Y333 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LSM2Q9Y333 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LSM2Q9Y333 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LSM2Q9Y333 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LSM2Q9Y333 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LSM2Q9Y333 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LSM2Q9Y333 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LSM2Q9Y333 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LSM2Q9Y333 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LSM2Q9Y333 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
LSM2Q9Y333 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LSM2Q9Y333 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LSM2Q9Y333 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LSM2Q9Y333 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.75■□□□□ 0.91
LSM2Q9Y333 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LSM2Q9Y333 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LSM2Q9Y333 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LSM2Q9Y333 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LSM2Q9Y333 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LSM2Q9Y333 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LSM2Q9Y333 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LSM2Q9Y333 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LSM2Q9Y333 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.74■□□□□ 0.91
LSM2Q9Y333 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.74■□□□□ 0.91
LSM2Q9Y333 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.74■□□□□ 0.91
LSM2Q9Y333 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LSM2Q9Y333 LINC00565-201ENST00000562710 2331 ntBASIC20.73■□□□□ 0.91
LSM2Q9Y333 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LSM2Q9Y333 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LSM2Q9Y333 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LSM2Q9Y333 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LSM2Q9Y333 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
LSM2Q9Y333 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LSM2Q9Y333 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LSM2Q9Y333 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LSM2Q9Y333 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.73■□□□□ 0.91
LSM2Q9Y333 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LSM2Q9Y333 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LSM2Q9Y333 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LSM2Q9Y333 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LSM2Q9Y333 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LSM2Q9Y333 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LSM2Q9Y333 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LSM2Q9Y333 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LSM2Q9Y333 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.71■□□□□ 0.91
LSM2Q9Y333 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.71■□□□□ 0.91
LSM2Q9Y333 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LSM2Q9Y333 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LSM2Q9Y333 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LSM2Q9Y333 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
LSM2Q9Y333 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LSM2Q9Y333 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LSM2Q9Y333 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LSM2Q9Y333 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LSM2Q9Y333 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.71■□□□□ 0.91
LSM2Q9Y333 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.7■□□□□ 0.91
LSM2Q9Y333 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.7■□□□□ 0.9
LSM2Q9Y333 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.7■□□□□ 0.9
LSM2Q9Y333 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSM2Q9Y333 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.7■□□□□ 0.9
LSM2Q9Y333 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms