Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERGIC3Q9Y282 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERGIC3Q9Y282 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERGIC3Q9Y282 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.18■□□□□ 0.98
ERGIC3Q9Y282 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ERGIC3Q9Y282 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERGIC3Q9Y282 EP400NL-214ENST00000641289 2402 ntBASIC21.17■□□□□ 0.98
ERGIC3Q9Y282 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERGIC3Q9Y282 AC004812.2-201ENST00000611079 2094 ntBASIC21.17■□□□□ 0.98
ERGIC3Q9Y282 SLC25A24-204ENST00000569674 2357 ntBASIC21.16■□□□□ 0.98
ERGIC3Q9Y282 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERGIC3Q9Y282 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ERGIC3Q9Y282 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERGIC3Q9Y282 AL359258.2-201ENST00000564063 1566 ntBASIC21.16■□□□□ 0.98
ERGIC3Q9Y282 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.16■□□□□ 0.98
ERGIC3Q9Y282 AC044849.2-201ENST00000606596 710 ntBASIC21.16■□□□□ 0.98
ERGIC3Q9Y282 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERGIC3Q9Y282 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.16■□□□□ 0.98
ERGIC3Q9Y282 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERGIC3Q9Y282 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 C1orf229-201ENST00000623686 2258 ntBASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 AC021231.2-201ENST00000594613 730 ntBASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERGIC3Q9Y282 MIR219A2-201ENST00000608502 1504 ntBASIC21.14■□□□□ 0.98
ERGIC3Q9Y282 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
ERGIC3Q9Y282 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ERGIC3Q9Y282 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ERGIC3Q9Y282 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 AC008813.1-201ENST00000536597 885 ntBASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ERGIC3Q9Y282 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERGIC3Q9Y282 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.13■□□□□ 0.97
ERGIC3Q9Y282 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ERGIC3Q9Y282 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERGIC3Q9Y282 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERGIC3Q9Y282 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.13■□□□□ 0.97
ERGIC3Q9Y282 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERGIC3Q9Y282 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERGIC3Q9Y282 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.11■□□□□ 0.97
ERGIC3Q9Y282 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERGIC3Q9Y282 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.11■□□□□ 0.97
ERGIC3Q9Y282 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.11■□□□□ 0.97
ERGIC3Q9Y282 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERGIC3Q9Y282 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ERGIC3Q9Y282 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERGIC3Q9Y282 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERGIC3Q9Y282 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERGIC3Q9Y282 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 DUX4L29-201ENST00000425409 679 ntBASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 AC148477.6-201ENST00000623746 465 ntBASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.1■□□□□ 0.97
ERGIC3Q9Y282 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ERGIC3Q9Y282 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ERGIC3Q9Y282 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERGIC3Q9Y282 ABCB10P4-201ENST00000566803 2184 ntBASIC21.09■□□□□ 0.97
ERGIC3Q9Y282 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.09■□□□□ 0.97
ERGIC3Q9Y282 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERGIC3Q9Y282 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERGIC3Q9Y282 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERGIC3Q9Y282 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERGIC3Q9Y282 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms