Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB4Q9UN71 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB4Q9UN71 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB4Q9UN71 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGB4Q9UN71 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
PCDHGB4Q9UN71 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PCDHGB4Q9UN71 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGB4Q9UN71 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHGB4Q9UN71 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PCDHGB4Q9UN71 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHGB4Q9UN71 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
PCDHGB4Q9UN71 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
PCDHGB4Q9UN71 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB4Q9UN71 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB4Q9UN71 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB4Q9UN71 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB4Q9UN71 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB4Q9UN71 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGB4Q9UN71 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB4Q9UN71 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB4Q9UN71 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB4Q9UN71 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGB4Q9UN71 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGB4Q9UN71 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDHGB4Q9UN71 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGB4Q9UN71 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGB4Q9UN71 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB4Q9UN71 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB4Q9UN71 AC093536.1-201ENST00000569153 554 ntBASIC22.41■■□□□ 1.18
PCDHGB4Q9UN71 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB4Q9UN71 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB4Q9UN71 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB4Q9UN71 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB4Q9UN71 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB4Q9UN71 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGB4Q9UN71 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB4Q9UN71 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB4Q9UN71 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGB4Q9UN71 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGB4Q9UN71 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB4Q9UN71 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGB4Q9UN71 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGB4Q9UN71 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGB4Q9UN71 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGB4Q9UN71 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGB4Q9UN71 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
PCDHGB4Q9UN71 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGB4Q9UN71 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGB4Q9UN71 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGB4Q9UN71 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGB4Q9UN71 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDHGB4Q9UN71 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB4Q9UN71 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB4Q9UN71 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB4Q9UN71 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB4Q9UN71 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB4Q9UN71 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB4Q9UN71 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PCDHGB4Q9UN71 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PCDHGB4Q9UN71 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 AC007029.1-201ENST00000604183 313 ntBASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PCDHGB4Q9UN71 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB4Q9UN71 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDHGB4Q9UN71 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB4Q9UN71 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB4Q9UN71 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB4Q9UN71 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB4Q9UN71 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB4Q9UN71 MIR4449-201ENST00000578365 66 ntBASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms