Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AC087623.3-201ENST00000607047 1098 ntBASIC30.21■■■□□ 2.43
CCNL1Q9UK58 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCNL1Q9UK58 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCNL1Q9UK58 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CCNL1Q9UK58 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.2■■■□□ 2.43
CCNL1Q9UK58 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CCNL1Q9UK58 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CCNL1Q9UK58 AC091305.1-201ENST00000479476 895 ntBASIC30.19■■■□□ 2.42
CCNL1Q9UK58 AL162430.1-201ENST00000480705 870 ntBASIC30.19■■■□□ 2.42
CCNL1Q9UK58 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CCNL1Q9UK58 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCNL1Q9UK58 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.19■■■□□ 2.42
CCNL1Q9UK58 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCNL1Q9UK58 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.18■■■□□ 2.42
CCNL1Q9UK58 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.18■■■□□ 2.42
CCNL1Q9UK58 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CCNL1Q9UK58 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.17■■■□□ 2.42
CCNL1Q9UK58 DUX4L19-201ENST00000557448 1267 ntBASIC30.17■■■□□ 2.42
CCNL1Q9UK58 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCNL1Q9UK58 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
CCNL1Q9UK58 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.16■■■□□ 2.42
CCNL1Q9UK58 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
CCNL1Q9UK58 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.16■■■□□ 2.42
CCNL1Q9UK58 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCNL1Q9UK58 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCNL1Q9UK58 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.16■■■□□ 2.42
CCNL1Q9UK58 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CCNL1Q9UK58 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.15■■■□□ 2.42
CCNL1Q9UK58 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCNL1Q9UK58 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCNL1Q9UK58 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCNL1Q9UK58 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.14■■■□□ 2.42
CCNL1Q9UK58 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
CCNL1Q9UK58 AC004448.1-201ENST00000458332 883 ntBASIC30.14■■■□□ 2.42
CCNL1Q9UK58 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.14■■■□□ 2.42
CCNL1Q9UK58 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.14■■■□□ 2.42
CCNL1Q9UK58 SF1-220ENST00000626028 704 ntTSL 2 BASIC30.14■■■□□ 2.42
CCNL1Q9UK58 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCNL1Q9UK58 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCNL1Q9UK58 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC30.13■■■□□ 2.41
CCNL1Q9UK58 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CCNL1Q9UK58 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCNL1Q9UK58 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.12■■■□□ 2.41
CCNL1Q9UK58 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.12■■■□□ 2.41
CCNL1Q9UK58 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30.12■■■□□ 2.41
CCNL1Q9UK58 MIR4767-201ENST00000582827 78 ntBASIC30.12■■■□□ 2.41
CCNL1Q9UK58 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.12■■■□□ 2.41
CCNL1Q9UK58 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
CCNL1Q9UK58 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCNL1Q9UK58 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCNL1Q9UK58 MAG-206ENST00000597035 542 ntTSL 4 BASIC30.11■■■□□ 2.41
CCNL1Q9UK58 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCNL1Q9UK58 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCNL1Q9UK58 SYT6-210ENST00000641643 1587 ntBASIC30.11■■■□□ 2.41
CCNL1Q9UK58 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCNL1Q9UK58 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.1■■■□□ 2.41
CCNL1Q9UK58 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCNL1Q9UK58 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.1■■■□□ 2.41
CCNL1Q9UK58 CA15P2-201ENST00000611168 834 ntBASIC30.1■■■□□ 2.41
CCNL1Q9UK58 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCNL1Q9UK58 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.1■■■□□ 2.41
CCNL1Q9UK58 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCNL1Q9UK58 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCNL1Q9UK58 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CCNL1Q9UK58 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCNL1Q9UK58 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.09■■■□□ 2.41
CCNL1Q9UK58 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCNL1Q9UK58 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.08■■■□□ 2.41
CCNL1Q9UK58 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCNL1Q9UK58 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
CCNL1Q9UK58 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.07■■■□□ 2.4
CCNL1Q9UK58 RASA4CP-201ENST00000424092 1398 ntBASIC30.06■■■□□ 2.4
CCNL1Q9UK58 PTMA-205ENST00000410064 814 ntTSL 2 BASIC30.06■■■□□ 2.4
CCNL1Q9UK58 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCNL1Q9UK58 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
CCNL1Q9UK58 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CCNL1Q9UK58 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.06■■■□□ 2.4
CCNL1Q9UK58 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCNL1Q9UK58 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.05■■■□□ 2.4
CCNL1Q9UK58 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.05■■■□□ 2.4
CCNL1Q9UK58 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCNL1Q9UK58 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
CCNL1Q9UK58 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCNL1Q9UK58 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCNL1Q9UK58 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CCNL1Q9UK58 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30.04■■■□□ 2.4
CCNL1Q9UK58 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCNL1Q9UK58 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.04■■■□□ 2.4
CCNL1Q9UK58 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.04■■■□□ 2.4
CCNL1Q9UK58 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.04■■■□□ 2.4
CCNL1Q9UK58 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.04■■■□□ 2.4
CCNL1Q9UK58 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCNL1Q9UK58 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
CCNL1Q9UK58 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCNL1Q9UK58 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CCNL1Q9UK58 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.03■■■□□ 2.4
CCNL1Q9UK58 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCNL1Q9UK58 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CCNL1Q9UK58 AC005703.6-201ENST00000623265 1329 ntBASIC30.02■■■□□ 2.4
CCNL1Q9UK58 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms