Protein–RNA interactions for Protein: Q9HB40

SCPEP1, Retinoid-inducible serine carboxypeptidase, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCPEP1Q9HB40 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCPEP1Q9HB40 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCPEP1Q9HB40 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCPEP1Q9HB40 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.85■□□□□ 0.77
SCPEP1Q9HB40 AL117328.2-201ENST00000624617 1940 ntBASIC19.84■□□□□ 0.77
SCPEP1Q9HB40 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCPEP1Q9HB40 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.84■□□□□ 0.77
SCPEP1Q9HB40 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SCPEP1Q9HB40 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCPEP1Q9HB40 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCPEP1Q9HB40 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCPEP1Q9HB40 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCPEP1Q9HB40 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SCPEP1Q9HB40 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCPEP1Q9HB40 RNF165-205ENST00000588679 2904 ntBASIC19.83■□□□□ 0.77
SCPEP1Q9HB40 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCPEP1Q9HB40 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCPEP1Q9HB40 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
SCPEP1Q9HB40 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.83■□□□□ 0.77
SCPEP1Q9HB40 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SCPEP1Q9HB40 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.83■□□□□ 0.76
SCPEP1Q9HB40 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SCPEP1Q9HB40 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SCPEP1Q9HB40 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCPEP1Q9HB40 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 AL121603.2-201ENST00000557373 2117 ntBASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 HLA-V-202ENST00000446817 847 ntBASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SCPEP1Q9HB40 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCPEP1Q9HB40 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCPEP1Q9HB40 HLA-L-211ENST00000482052 1765 ntBASIC19.81■□□□□ 0.76
SCPEP1Q9HB40 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.81■□□□□ 0.76
SCPEP1Q9HB40 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SCPEP1Q9HB40 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.81■□□□□ 0.76
SCPEP1Q9HB40 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCPEP1Q9HB40 C9orf163-202ENST00000624034 2573 ntBASIC19.81■□□□□ 0.76
SCPEP1Q9HB40 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCPEP1Q9HB40 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SCPEP1Q9HB40 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCPEP1Q9HB40 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCPEP1Q9HB40 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCPEP1Q9HB40 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SCPEP1Q9HB40 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCPEP1Q9HB40 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
SCPEP1Q9HB40 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCPEP1Q9HB40 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms