Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A2Q9H9S3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A2Q9H9S3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A2Q9H9S3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.8■□□□□ 0.92
SEC61A2Q9H9S3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SEC61A2Q9H9S3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SEC61A2Q9H9S3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.8■□□□□ 0.92
SEC61A2Q9H9S3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.8■□□□□ 0.92
SEC61A2Q9H9S3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.8■□□□□ 0.92
SEC61A2Q9H9S3 PVT1_1.1-201ENST00000615125 194 ntBASIC20.8■□□□□ 0.92
SEC61A2Q9H9S3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SEC61A2Q9H9S3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A2Q9H9S3 AL139125.2-201ENST00000623134 1869 ntBASIC20.79■□□□□ 0.92
SEC61A2Q9H9S3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A2Q9H9S3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A2Q9H9S3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A2Q9H9S3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.79■□□□□ 0.92
SEC61A2Q9H9S3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.79■□□□□ 0.92
SEC61A2Q9H9S3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A2Q9H9S3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 AC087393.1-201ENST00000582896 145 ntBASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SEC61A2Q9H9S3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEC61A2Q9H9S3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SEC61A2Q9H9S3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.77■□□□□ 0.92
SEC61A2Q9H9S3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEC61A2Q9H9S3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SEC61A2Q9H9S3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SEC61A2Q9H9S3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SEC61A2Q9H9S3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SEC61A2Q9H9S3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEC61A2Q9H9S3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEC61A2Q9H9S3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEC61A2Q9H9S3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEC61A2Q9H9S3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.76■□□□□ 0.91
SEC61A2Q9H9S3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.76■□□□□ 0.91
SEC61A2Q9H9S3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEC61A2Q9H9S3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEC61A2Q9H9S3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEC61A2Q9H9S3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEC61A2Q9H9S3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEC61A2Q9H9S3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.75■□□□□ 0.91
SEC61A2Q9H9S3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.75■□□□□ 0.91
SEC61A2Q9H9S3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.75■□□□□ 0.91
SEC61A2Q9H9S3 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.75■□□□□ 0.91
SEC61A2Q9H9S3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SEC61A2Q9H9S3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEC61A2Q9H9S3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SEC61A2Q9H9S3 AC093323.1-202ENST00000635031 2045 ntBASIC20.75■□□□□ 0.91
SEC61A2Q9H9S3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.75■□□□□ 0.91
SEC61A2Q9H9S3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEC61A2Q9H9S3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEC61A2Q9H9S3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEC61A2Q9H9S3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.74■□□□□ 0.91
SEC61A2Q9H9S3 KRT8P33-201ENST00000508125 1423 ntBASIC20.74■□□□□ 0.91
SEC61A2Q9H9S3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEC61A2Q9H9S3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.74■□□□□ 0.91
SEC61A2Q9H9S3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEC61A2Q9H9S3 LINC01124-201ENST00000409786 2117 ntBASIC20.74■□□□□ 0.91
SEC61A2Q9H9S3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEC61A2Q9H9S3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A2Q9H9S3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A2Q9H9S3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A2Q9H9S3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A2Q9H9S3 RARRES2P1-201ENST00000474487 481 ntBASIC20.73■□□□□ 0.91
SEC61A2Q9H9S3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.73■□□□□ 0.91
SEC61A2Q9H9S3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.73■□□□□ 0.91
SEC61A2Q9H9S3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A2Q9H9S3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A2Q9H9S3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.73■□□□□ 0.91
SEC61A2Q9H9S3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SEC61A2Q9H9S3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEC61A2Q9H9S3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC61A2Q9H9S3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC61A2Q9H9S3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC61A2Q9H9S3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.72■□□□□ 0.91
SEC61A2Q9H9S3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEC61A2Q9H9S3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC61A2Q9H9S3 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.72■□□□□ 0.91
SEC61A2Q9H9S3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SEC61A2Q9H9S3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEC61A2Q9H9S3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEC61A2Q9H9S3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEC61A2Q9H9S3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.71■□□□□ 0.91
SEC61A2Q9H9S3 MIR6089-201ENST00000616698 64 ntBASIC20.71■□□□□ 0.91
SEC61A2Q9H9S3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEC61A2Q9H9S3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.71■□□□□ 0.91
SEC61A2Q9H9S3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.71■□□□□ 0.91
SEC61A2Q9H9S3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEC61A2Q9H9S3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.71■□□□□ 0.91
SEC61A2Q9H9S3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.7■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms