Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA4Q9BXL8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA4Q9BXL8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA4Q9BXL8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA4Q9BXL8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.94■□□□□ 0.94
CDCA4Q9BXL8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CDCA4Q9BXL8 HLA-L-211ENST00000482052 1765 ntBASIC20.94■□□□□ 0.94
CDCA4Q9BXL8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDCA4Q9BXL8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA4Q9BXL8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.93■□□□□ 0.94
CDCA4Q9BXL8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.93■□□□□ 0.94
CDCA4Q9BXL8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.93■□□□□ 0.94
CDCA4Q9BXL8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA4Q9BXL8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA4Q9BXL8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.93■□□□□ 0.94
CDCA4Q9BXL8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA4Q9BXL8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.93■□□□□ 0.94
CDCA4Q9BXL8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDCA4Q9BXL8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA4Q9BXL8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA4Q9BXL8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA4Q9BXL8 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.92■□□□□ 0.94
CDCA4Q9BXL8 LINC01971-201ENST00000617888 1048 ntBASIC20.92■□□□□ 0.94
CDCA4Q9BXL8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA4Q9BXL8 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.92■□□□□ 0.94
CDCA4Q9BXL8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA4Q9BXL8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA4Q9BXL8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA4Q9BXL8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA4Q9BXL8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 DUX4L13-201ENST00000554103 1267 ntBASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 DUX4L15-201ENST00000611059 1267 ntBASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 DUX4L23-201ENST00000615195 1269 ntBASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 DUX4L24-201ENST00000617576 1269 ntBASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 DUX4L22-201ENST00000618238 1269 ntBASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 DUX4L20-201ENST00000619712 1269 ntBASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 DUX4L21-201ENST00000622058 1269 ntBASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 DUX4L10-201ENST00000622460 1267 ntBASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 DUX4L25-201ENST00000624915 1269 ntBASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA4Q9BXL8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 AC233723.2-201ENST00000623798 2106 ntBASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDCA4Q9BXL8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDCA4Q9BXL8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA4Q9BXL8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA4Q9BXL8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA4Q9BXL8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CDCA4Q9BXL8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.87■□□□□ 0.93
CDCA4Q9BXL8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDCA4Q9BXL8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 EP400NL-214ENST00000641289 2402 ntBASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA4Q9BXL8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDCA4Q9BXL8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDCA4Q9BXL8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CDCA4Q9BXL8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDCA4Q9BXL8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDCA4Q9BXL8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.85■□□□□ 0.93
CDCA4Q9BXL8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDCA4Q9BXL8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms